Gene Xfasm12_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1161 
Symbol 
ID6119686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1235983 
End bp1236564 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID641649181 
Producthypothetical protein 
Protein accessionYP_001775743 
Protein GI170730310 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000000330342 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGT CCATTATTCC GTTCGATTTT CATTCTCACG CTGTGCGCGT TGTGATGCGC 
GATGGCAATC CGTGGTTTGT TGCTACCGAT GTGTGTACGG CATTGGGGTA CCGAAATCCA 
AGCAAAGCAA TCGCAGATCA TTTGGACGAT GACGAGCGGT CTAACGAACA GTTAGACCGG 
TCCAGGATGG GTAGCAAAGC CGTCATCATT TCCGAGTCTG GCCTATACGC TTTGATACTC 
CGCTCCAGAA AGCCAGAGGC ACGTAAATTC GCCAAGTGGG TAACCTCGGA AGTCATGCCC 
TCAATCCGCA AGACGGGGGG TTATTCCGCT ACCGGAACGG TGGTGAATGA CGATGTGCTC 
TATGCCATCT GGTTTCTGTG CGGCCAATTC AAGTCGCTGC ATGAAACGGT ATTCACCAAC 
AAAGTTCCGC AAGCACTGGC ATGGCTTGGG GCTAGGCAGA TGAGCGGGGC GCTTTACGAC 
CGCCTGCTAG ATGGCCTGCA CGGCGGCGTT GGCCCTATAG AAAAAGCCCT CGGCCCTCAG 
ATGGAGCGGG TTAGTGGGAT TACCTATCAC CGCTTCAGCT AA
 
Protein sequence
MTQSIIPFDF HSHAVRVVMR DGNPWFVATD VCTALGYRNP SKAIADHLDD DERSNEQLDR 
SRMGSKAVII SESGLYALIL RSRKPEARKF AKWVTSEVMP SIRKTGGYSA TGTVVNDDVL 
YAIWFLCGQF KSLHETVFTN KVPQALAWLG ARQMSGALYD RLLDGLHGGV GPIEKALGPQ 
MERVSGITYH RFS