Gene Xfasm12_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1158 
Symbol 
ID6119683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1231536 
End bp1232036 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content53% 
IMG OID641649178 
Productphage-related lysozyme 
Protein accessionYP_001775740 
Protein GI170730307 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.901858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCA TTGGTGAAGA AGGCATTGCA CTGATCAAGT TTTTTGAGGG TTGCAAGCTG 
AGCCCGTACA CCTGTTCTGG TGGTGTGTTG ACGATTGGTT ATGGCGAGAC GGGCAAGCAT
GTGACGCCTG ATATGTGTCT TGCCAATGAG CAGGAAGCCG ATGCGATATT ACGTGCTCGA
TTAGCCAAAG AGTTTGAACC GGCTGTACGG CGTTATGTGC GTGTGCCACT CAAGCAACAG
CAGTTCGATG CATTGGTATC GCTGAGCTTC AATATTGGTG TGGGCGCGTT TCACCGCTCG
ACGCTGTTAC GCAAGCTTAA TGCCGGTGAT GTTGCTGGTG CGGCGGAGCA GTTTCATGTG
TGGAAATGGG CGGGCGGTCG TGTGCAGTCT GGTTTAATCA TCAGGCGTGC CGCCGAACGT
GTGTTATTTG AATATGGTGA CTGGCGTGCC GAAGCGGAGA AACAGCGTGC CGCTTTGAAG
AGCAAGGGCC GCCGTGGTTG A
 
Protein sequence
MQTIGEEGIA LIKFFEGCKL SPYTCSGGVL TIGYGETGKH VTPDMCLANE QEADAILRAR 
LAKEFEPAVR RYVRVPLKQQ QFDALVSLSF NIGVGAFHRS TLLRKLNAGD VAGAAEQFHV
WKWAGGRVQS GLIIRRAAER VLFEYGDWRA EAEKQRAALK SKGRRG