| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1121 |
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| Symbol | |
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| ID | 6119646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1202174 |
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| End bp | 1203169 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649142 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001775704 |
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| Protein GI | 170730271 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.664782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGGGA AGGGTGAGGG TTACATTGAA TGTGGTCACG ATACGATCAC TTGGTGTTTC
GGACACATGC TCGAACAAGC TGAGCCAGAT GCGTACATTT CTGAAGACGT TCCACTGAAT
CCAAAAACTG GTAAGAAAAT CTGGCGCGTC GAAGAACTGC CTATCATTCC TGAAACGTGG
ATCATGCAGC CCCGCGAAGA CGCGAAAGCG CAGCTTGAGG TCATCAAGCG GCTGCTGAAA
AAGGCAACTG AAATTGTCAA TGCTGGTGAC CCAGACCGTG AGGGGCAGTT ACTCGTTGAT
GAAGTGCTGG AATACTTCGA CTGCCACAAG TCGGTGCAAC GCTTCTGGGT ATCGGCACAA
GATTCCGTAT CGGTGCAGCG TGGCCTAGCT GCGCTCAGAA GTAACGCCGA GTATCAAGGC
TTTGCCAATG CAGCACGGGC ACGTAGTCGG GCCGACTGGC TGATTGGTAT CAATTTCAGC
AGGGCTTATA CGCTGCGCGC ACAGCGCGGG GGGTCGCGTG CATTGCTGAC TATAGGGCGT
GTACAGACTC CAACGCTGGC GCTGGTGGTC ATGCGTGATC GTGAGATTGA GGCATTCAAA
TCGATTCCTT ACCACACGAT CCGTGCAGCA TTTAAACACG AGGGTGGTGT ATTCGTTGCC
GTTTGGCGGG CGAAAGAAGA TCAAGTTGGG CTAGACCCAG AGGGTCGTTT GGTCGACACG
GTCATCGCGA ACACGTTGGT CGAATCCATC ACCGGTCATA TAGGTAAGGT CATCGAGTAC
AAGCAGGAAC CAAAGAAGAA GGCACAGCCG CGTGCTTATT CACTTTCTGA CATTACTCTC
TTGGCGTCTA ACAAATTCGG GTATAGCGCG GCAGATGTGC TTGAGGTGTG CCAATCGCTT
TATGAGACAC ATAAGCTCAC GAGCTACCCA AGAACCGATT GTGGGTACCT GCCGGAATCA
CAACCATCTA ATCACTGCCA CCATTGCCAA CGGTAG
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| Protein sequence | MTGKGEGYIE CGHDTITWCF GHMLEQAEPD AYISEDVPLN PKTGKKIWRV EELPIIPETW
IMQPREDAKA QLEVIKRLLK KATEIVNAGD PDREGQLLVD EVLEYFDCHK SVQRFWVSAQ
DSVSVQRGLA ALRSNAEYQG FANAARARSR ADWLIGINFS RAYTLRAQRG GSRALLTIGR
VQTPTLALVV MRDREIEAFK SIPYHTIRAA FKHEGGVFVA VWRAKEDQVG LDPEGRLVDT
VIANTLVESI TGHIGKVIEY KQEPKKKAQP RAYSLSDITL LASNKFGYSA ADVLEVCQSL
YETHKLTSYP RTDCGYLPES QPSNHCHHCQ R
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