Gene Xfasm12_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1108 
SymbolaspS 
ID6119633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1186193 
End bp1187962 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content52% 
IMG OID641649132 
Productaspartyl-tRNA synthetase 
Protein accessionYP_001775694 
Protein GI170730261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000320329 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACCC ATTTCTGCGG CTTGATTAAT GAAACATTGA TCGGCCACAC CGTTACCCTT 
GCTGGCTGGA CCGATGTGGC CCGCAACCTG GGCGGAGTTT GCTTTATCGA TTTACGTGAC
CACGAAGGGA TCGTACAAAT CACGGTAGAT TCACGTGCCA TCGACCAGAA CAACTCAGAA
CTGTTCAAGG TTGCTAGTGG CTTGAGTTAT GAGGATGTAC TACAAGTTGA AGGCGTCGTG
TGCGCCCGTC ATGCAGTCAA CGATAAGATC AAGACCGGCA AGGTCGAAGT GATTGCTACA
AAAATCAAGA TACTCAATAA GGCTGCACCT TTACCGTTCC ATGCTCACGA AAACCCAGGT
GAGGATATCC GTCTGAAATA CCGCTACCTG GACCTGCGCC GCCCGGAAAT GCAGCGTATG
CAACGTACGC GTATCAAACT GGTACAGGCA CTACGTCGCC ATCTGGACAT GCACGGTTTC
CAAGACATTG AAACGCCAAT CCTAACGAAA GCAACCCCTG AAGGAGCCCG TGACTTTCTT
GTTCCCGCCA GAATGCACCC GGGCGAATTT TACGCCTTAC CGCAATCACC ACAGCTTTTC
AAACAAATAC TAATGGTGGC TGGTTTCGAT CGCTACTATC AAATCGCACG CTGTTTCCGT
GACGAAGCAT TGCGTGCGGA TCGCCAACTT GAATTCACCC AACTGGATAT GGAGTTTGCT
TTTGTAAGCG AACGTGACGT CCAGGACTTT GTTGAAGAGA TGATTCGGAG AGTCTTCAAA
GAGGTCGCCG GGATCGAGCT TGATACAACG TTCCCCCGCA TGACATGGAA GGAAGCAATG
CGCCGTTTTG GCTCTGACAA ACCGGATCTG CGCATCAATC TAGAACTGAT TGATGTTGCC
GCACTCGTTG CTGACAGCAC ATTCACCCCA TTTACCGATG CCGTTGCACA TCCCAACGGT
CGTGTTGCCG CATTGCGTAT CCCCAGCGGG ACAGTATTGT CACGCAAGCA GATTGATGAA
TATGCCGCCT ACACAGCCAA GTATGGTGCC ACAGGACTTG CTTACGCCAA ACTCGCCCCT
ACAGGCGAAA TCACTTCGCC AATCGCTAAA TTTTTTTCCG AGGATGCCTT TGCTTCACTA
CTCTCACACA TCGGGGCGGA GAAAGGCGAC ATCGTGTTTT TCGGTGCTGG AAACTACAAC
AAAGTCTCCG ACTTCATGAG CGCGTTACGC CTGAAAGCCG GCAAAGATTT CGCCCTAATC
ACCGCAGACT GGCGCCCATT GTGGGTCACC GACTTTCCAA TGTTTGAGTG GGACGAAGAA
GCGCAGCGTT ACGTTGCCTT ACATCACCCC TTCACTGCAC CAGCAGCCAT TGACGATATT
GACGAATTAC GCGCACACGC CAGGACAGCC TTGTCCCGCG GCTATGACAT GGTACTCAAT
GGCAATGAAA TTGGCGGCGG CTCTATCCGT ATTCACCGTC CGGAAATGCA ACGTGCAGTC
TTTGAACTGC TCGGCATTAC TGAAGATGAA GCACGCGCCA AATTTGGTTT CCTCCTTGAT
GCACTGAATT ATGGTGCCCC ACCACACGGA GGGATTGCCT TTGGCATTGA CCGCATCGCC
GCACTGATCG CCGGCACTGA ATCAATCCGC GATGTTATTC CTTTTCCAAA GACCACCGGC
GCACAATGCC TGATGACCGA TGCACCCTCC CCCATATCGG AAGAGCAACT CTCTGAGATC
CATGTGATAA CGAAGAAAAC CACACCGTGA
 
Protein sequence
MRTHFCGLIN ETLIGHTVTL AGWTDVARNL GGVCFIDLRD HEGIVQITVD SRAIDQNNSE 
LFKVASGLSY EDVLQVEGVV CARHAVNDKI KTGKVEVIAT KIKILNKAAP LPFHAHENPG
EDIRLKYRYL DLRRPEMQRM QRTRIKLVQA LRRHLDMHGF QDIETPILTK ATPEGARDFL
VPARMHPGEF YALPQSPQLF KQILMVAGFD RYYQIARCFR DEALRADRQL EFTQLDMEFA
FVSERDVQDF VEEMIRRVFK EVAGIELDTT FPRMTWKEAM RRFGSDKPDL RINLELIDVA
ALVADSTFTP FTDAVAHPNG RVAALRIPSG TVLSRKQIDE YAAYTAKYGA TGLAYAKLAP
TGEITSPIAK FFSEDAFASL LSHIGAEKGD IVFFGAGNYN KVSDFMSALR LKAGKDFALI
TADWRPLWVT DFPMFEWDEE AQRYVALHHP FTAPAAIDDI DELRAHARTA LSRGYDMVLN
GNEIGGGSIR IHRPEMQRAV FELLGITEDE ARAKFGFLLD ALNYGAPPHG GIAFGIDRIA
ALIAGTESIR DVIPFPKTTG AQCLMTDAPS PISEEQLSEI HVITKKTTP