Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1108 |
Symbol | aspS |
ID | 6119633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1186193 |
End bp | 1187962 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649132 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001775694 |
Protein GI | 170730261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000320329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACCC ATTTCTGCGG CTTGATTAAT GAAACATTGA TCGGCCACAC CGTTACCCTT GCTGGCTGGA CCGATGTGGC CCGCAACCTG GGCGGAGTTT GCTTTATCGA TTTACGTGAC CACGAAGGGA TCGTACAAAT CACGGTAGAT TCACGTGCCA TCGACCAGAA CAACTCAGAA CTGTTCAAGG TTGCTAGTGG CTTGAGTTAT GAGGATGTAC TACAAGTTGA AGGCGTCGTG TGCGCCCGTC ATGCAGTCAA CGATAAGATC AAGACCGGCA AGGTCGAAGT GATTGCTACA AAAATCAAGA TACTCAATAA GGCTGCACCT TTACCGTTCC ATGCTCACGA AAACCCAGGT GAGGATATCC GTCTGAAATA CCGCTACCTG GACCTGCGCC GCCCGGAAAT GCAGCGTATG CAACGTACGC GTATCAAACT GGTACAGGCA CTACGTCGCC ATCTGGACAT GCACGGTTTC CAAGACATTG AAACGCCAAT CCTAACGAAA GCAACCCCTG AAGGAGCCCG TGACTTTCTT GTTCCCGCCA GAATGCACCC GGGCGAATTT TACGCCTTAC CGCAATCACC ACAGCTTTTC AAACAAATAC TAATGGTGGC TGGTTTCGAT CGCTACTATC AAATCGCACG CTGTTTCCGT GACGAAGCAT TGCGTGCGGA TCGCCAACTT GAATTCACCC AACTGGATAT GGAGTTTGCT TTTGTAAGCG AACGTGACGT CCAGGACTTT GTTGAAGAGA TGATTCGGAG AGTCTTCAAA GAGGTCGCCG GGATCGAGCT TGATACAACG TTCCCCCGCA TGACATGGAA GGAAGCAATG CGCCGTTTTG GCTCTGACAA ACCGGATCTG CGCATCAATC TAGAACTGAT TGATGTTGCC GCACTCGTTG CTGACAGCAC ATTCACCCCA TTTACCGATG CCGTTGCACA TCCCAACGGT CGTGTTGCCG CATTGCGTAT CCCCAGCGGG ACAGTATTGT CACGCAAGCA GATTGATGAA TATGCCGCCT ACACAGCCAA GTATGGTGCC ACAGGACTTG CTTACGCCAA ACTCGCCCCT ACAGGCGAAA TCACTTCGCC AATCGCTAAA TTTTTTTCCG AGGATGCCTT TGCTTCACTA CTCTCACACA TCGGGGCGGA GAAAGGCGAC ATCGTGTTTT TCGGTGCTGG AAACTACAAC AAAGTCTCCG ACTTCATGAG CGCGTTACGC CTGAAAGCCG GCAAAGATTT CGCCCTAATC ACCGCAGACT GGCGCCCATT GTGGGTCACC GACTTTCCAA TGTTTGAGTG GGACGAAGAA GCGCAGCGTT ACGTTGCCTT ACATCACCCC TTCACTGCAC CAGCAGCCAT TGACGATATT GACGAATTAC GCGCACACGC CAGGACAGCC TTGTCCCGCG GCTATGACAT GGTACTCAAT GGCAATGAAA TTGGCGGCGG CTCTATCCGT ATTCACCGTC CGGAAATGCA ACGTGCAGTC TTTGAACTGC TCGGCATTAC TGAAGATGAA GCACGCGCCA AATTTGGTTT CCTCCTTGAT GCACTGAATT ATGGTGCCCC ACCACACGGA GGGATTGCCT TTGGCATTGA CCGCATCGCC GCACTGATCG CCGGCACTGA ATCAATCCGC GATGTTATTC CTTTTCCAAA GACCACCGGC GCACAATGCC TGATGACCGA TGCACCCTCC CCCATATCGG AAGAGCAACT CTCTGAGATC CATGTGATAA CGAAGAAAAC CACACCGTGA
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Protein sequence | MRTHFCGLIN ETLIGHTVTL AGWTDVARNL GGVCFIDLRD HEGIVQITVD SRAIDQNNSE LFKVASGLSY EDVLQVEGVV CARHAVNDKI KTGKVEVIAT KIKILNKAAP LPFHAHENPG EDIRLKYRYL DLRRPEMQRM QRTRIKLVQA LRRHLDMHGF QDIETPILTK ATPEGARDFL VPARMHPGEF YALPQSPQLF KQILMVAGFD RYYQIARCFR DEALRADRQL EFTQLDMEFA FVSERDVQDF VEEMIRRVFK EVAGIELDTT FPRMTWKEAM RRFGSDKPDL RINLELIDVA ALVADSTFTP FTDAVAHPNG RVAALRIPSG TVLSRKQIDE YAAYTAKYGA TGLAYAKLAP TGEITSPIAK FFSEDAFASL LSHIGAEKGD IVFFGAGNYN KVSDFMSALR LKAGKDFALI TADWRPLWVT DFPMFEWDEE AQRYVALHHP FTAPAAIDDI DELRAHARTA LSRGYDMVLN GNEIGGGSIR IHRPEMQRAV FELLGITEDE ARAKFGFLLD ALNYGAPPHG GIAFGIDRIA ALIAGTESIR DVIPFPKTTG AQCLMTDAPS PISEEQLSEI HVITKKTTP
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