Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1096 |
Symbol | |
ID | 6120722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1177838 |
End bp | 1179166 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641649120 |
Product | hypothetical protein |
Protein accession | YP_001775683 |
Protein GI | 170730250 |
COG category | [R] General function prediction only |
COG ID | [COG4128] Zonula occludens toxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0711878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGTCT TTAATGAGGG TGTGCCTCGT TCTGGGAAAA GTTACGATGC AGTGAAGCAT CATATTCTTC CTGCTCTTCG TGAGGGTCGT CGTGTTTATG CACGTTTGAA TGGTTTGCGT CATGAGTTGA TTGCTCAGTA TTTGGAGATG TCAGAGGCTC GTATTCGTGA ACTTCTTTTT GTTGTTAATA CGGATGATGT ATTAAATACA TTCGTTTGTT ATCGTGATGA AGTTGACGGC AAATGGTGTA TTGAAGATCG TTTTAAGGAT GTGTTAATCG TTATTGATGA GGTGCATGAG TTTTATGTTG AATCTCGTGC ACCGTTGGCG CCTCAGATAG AAAATTTCTG GGCGTTATTG GGTCAGAATG GCGGTGATGC AGTGCTGATG ACGCAGTGGA TTAAGCGCAT GCATCCTGCG ATTCGTGCAC GTATTGAGCG TAAGCATAGT TTTCAGAAAT TGACGGTTGT TGGTCTCAAG AACCGTTATC GTGTGACGTA TTACCATACT GTGGCGGCAG GTAAGTTTGA GAAGGTAGGA AGTCAGACGT TTAAATATGA TGCGTCTATT TTTCCTCTTT ATGATGGGTA TGCTCCAGGG GCACGCAATA CGGAGGTGTA TTCTCAGGGT AAGAGAACAG TCTGGGCAGT GATGTTAATA AAGGCTATTT TTTTCTTGGC AGTTGGTGTT GTGGGGTTTC ATTTTTATTC TCGTTATTTC GGTGGTGCTG GTCTTTCTAC CCATAATGTT TCTAGTCCTT CCTCTTCAGG TGTAGGGCAA GTGTTTAAAC CTGGTCAGGT TGTTTCTGGT CCTGTTCATC AAGACGTTTC TGCTCCTGTG GTACCTCCTG TTGATCCTTT GTCAGATTTG GGTCCTGAGC AACGTTATAT TTTTGATCTT AATGCCAAGG GTCGGTTGCG TTTGGCTGCG CTTGCGCAGG TGGGGCATGA GTATCGTGCT TGGGTGCAAT GGATTAATAC GGAGAATTTG GTGATTGAGC AGCTTGATTT AGAGCAGTTG CGTGCTTTGG GTTTTGATGT TTCTGTGCAC TCTTATGGCG TGCGTATTTC TGTCCTTAGT CATGTTCTAG TGGCGACAGC ATGGCCTTGG CGGGAGCCTG TTCGTGAAAC GGACCCGCGT TTATATAATT TATCTCGTGA TCAGCAGGGC GCAGTGAGCA TTGCGAGCGC AGCGAGTGAT GCTCACGGAG AGCCTGCCGT TCAGGGAGGG GTGATAGAGA AGGGGGAGCG TGCTATGGGA ACGTTTCCGG AATCACCTGG CTATGAGCAT CACGATGAGT CAGGGGGTGG TTCTTTGTTT TCGCGTTAG
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Protein sequence | MLVFNEGVPR SGKSYDAVKH HILPALREGR RVYARLNGLR HELIAQYLEM SEARIRELLF VVNTDDVLNT FVCYRDEVDG KWCIEDRFKD VLIVIDEVHE FYVESRAPLA PQIENFWALL GQNGGDAVLM TQWIKRMHPA IRARIERKHS FQKLTVVGLK NRYRVTYYHT VAAGKFEKVG SQTFKYDASI FPLYDGYAPG ARNTEVYSQG KRTVWAVMLI KAIFFLAVGV VGFHFYSRYF GGAGLSTHNV SSPSSSGVGQ VFKPGQVVSG PVHQDVSAPV VPPVDPLSDL GPEQRYIFDL NAKGRLRLAA LAQVGHEYRA WVQWINTENL VIEQLDLEQL RALGFDVSVH SYGVRISVLS HVLVATAWPW REPVRETDPR LYNLSRDQQG AVSIASAASD AHGEPAVQGG VIEKGERAMG TFPESPGYEH HDESGGGSLF SR
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