Gene Xfasm12_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1079 
Symbol 
ID6120704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1166691 
End bp1167335 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content50% 
IMG OID641649104 
Productphosphoglycerate mutase 
Protein accessionYP_001775668 
Protein GI170730235 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000000119918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTT TGCTTGCTCG TCATGGAGAG ACACTTTGGA ATGCTGAAGG TCGCTATCAA 
GGCCAAATTG ACATTCCTCT TTCTTCTGTT GGTGAGGCTC AGGCGCGTGC CCTTGGTGAG 
CGCCTACGGG ATGTAGTCAT TGCTCGTGCC GTGGCGTCCC CCTTGCTACG GGCCCAATAC 
ACTGCACAAC TGGCCTTGGG TGAAAGCCGC ATAGCACAGT TATTGATTGA GCCGGATCTG 
AAAGAAATTG CCCACGGTGA CTGGGAGGGC CTTTTAGATA CTGAGATTCA TGCAATGGAT 
CCCACACGGC TGCACGCTTG GCGTAAAGCA CCCGAGACAG TCATCATGCC TAACGGTGAA 
TCACTGCACC AAGTCCTAGA ACGCAGCTGG CGTGGTTTAA CAACCGCCGT TGTTGGATTA 
GGGATTGACG ATATCTTATT AGTCGTTGCG CATGATGCAG TCAACCGAGT GATCCTGTGT 
CGAGTGCTGG GATTGCCATT GGCTCATTTA TGGCGCTTCC ATCAAGCACC GACTACGCTG 
AACCTCTTGG AAGGAAAGAA TATTGACCAA CTACAAGTAG TACGCTTAAA CGATTGCAGT 
CATCACACTC CGTTCTTTGG TGAAGCTAAA CATCGCGCTT TATAA
 
Protein sequence
MRILLARHGE TLWNAEGRYQ GQIDIPLSSV GEAQARALGE RLRDVVIARA VASPLLRAQY 
TAQLALGESR IAQLLIEPDL KEIAHGDWEG LLDTEIHAMD PTRLHAWRKA PETVIMPNGE 
SLHQVLERSW RGLTTAVVGL GIDDILLVVA HDAVNRVILC RVLGLPLAHL WRFHQAPTTL 
NLLEGKNIDQ LQVVRLNDCS HHTPFFGEAK HRAL