| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1068 |
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| Symbol | tolB |
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| ID | 6120693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1153585 |
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| End bp | 1154904 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641649093 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001775657 |
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| Protein GI | 170730224 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.360403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAT TTCCACGCTG GCTGGCCATA TTGGTCGGTT TATTGTTCCC CTTATCAGCT
CTGACGCAGC AACAGGGGTT GACGATCGAT ATCGTTGGCG GCAACACCGC AGCGACTCCT
ATTGCAGTTT TACCTATGCC TTATCATGAC AGTGCAGGTG CTCCAGCTAC GGATGTTTCG
GGTGTTGTTG CTGCTGACTT GAACCGTTCA GGTCAGTTCC GTACGTTGCC TCTAGGGCAA
ATTACTGAGC GCCCTACTCA TGGAAGCGAG ATTCGATTTC CGACTTGGCA AGCACTGAAA
CAGGACTACA TCGTGGTTGG TCGTGTGCTT GATGCCAGGC AAGGGACTTA CCGTGTCGAG
TATGAACTAT TCGATGTTCG CAACGGCAAG CGAATGCTTG GATTGGCGAT GACTGCACGC
GCTAGCGCGA TGCGTGACGT TGCACACCAA ATGGCCGATG CAATCTACGA GAAAATTACC
GGCTTGCGCG GTGCATTCTT TACTCGCATT GCTTATGTCA CTGCCAGTGG TTCACACGGA
GCAATGCGGT ACGCACTGAT GGTTGCTGAC TCAGACGGCT ACAATCCACA AACCATCGTG
CGTTCAGCCG AACCACTGTT ATCACCTGAT TGGAGCCCTG ATGGTAAGAA ACTGGCGTAT
GTTAGTTTTG AGAAAGGGGG GTCTTCAATC TACATTCAAG ACATTGCTAC AGGTTCCCGT
GAATTGGTGT CAAGCTTCCG GGGTATCAAT GCTGCACCAT CGTTTGCTCC CGATGGCCAT
CGAATCGCTT TATCTCTGTC ACGAAGTGGT AATCCTGAAA TCTACGTCAT GGACTTGGTT
AGCAAACAGT TAATTCAGTT GACCAATAGT TTCGGAATTG ATACTGAACC GGTTTGGTCG
TCAGATGGGA AATTTATTTA TTTCACTTCT GACCGTGGTG GGCGTCCACA GATATATAAA
GTCGCCTCTG TTGGAGGCAC AGCGACACGT GTTACATTTC AAGGCAACTA CAATGCTACT
GCTAGCGTCT CCTATGACGA CAAGAAGATT GTCGTAGCAC AAGGGAGCGG TAACGTATAC
CGAATTGCAA TGATGGACCA AAGTTCGGGA TCTACAGTTT GGAACACTTT ATCTACTGGT
TCATTGGATG AATCTCCGAG CTTTGCTCCC AATGCAAGTA TGGTCCTTTA TGCAGCACGT
GAAGGGGGGC GTGGAGTACT TTATGCAGTC TCTGCGGATG CGCGTGTGCG CCAGCGCCTA
GTATCGGTTG ATAGTGATGT AAGAGAGCCT GCTTGGGGGC CTTACCGGAG CGTACATTAA
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| Protein sequence | MTKFPRWLAI LVGLLFPLSA LTQQQGLTID IVGGNTAATP IAVLPMPYHD SAGAPATDVS
GVVAADLNRS GQFRTLPLGQ ITERPTHGSE IRFPTWQALK QDYIVVGRVL DARQGTYRVE
YELFDVRNGK RMLGLAMTAR ASAMRDVAHQ MADAIYEKIT GLRGAFFTRI AYVTASGSHG
AMRYALMVAD SDGYNPQTIV RSAEPLLSPD WSPDGKKLAY VSFEKGGSSI YIQDIATGSR
ELVSSFRGIN AAPSFAPDGH RIALSLSRSG NPEIYVMDLV SKQLIQLTNS FGIDTEPVWS
SDGKFIYFTS DRGGRPQIYK VASVGGTATR VTFQGNYNAT ASVSYDDKKI VVAQGSGNVY
RIAMMDQSSG STVWNTLSTG SLDESPSFAP NASMVLYAAR EGGRGVLYAV SADARVRQRL
VSVDSDVREP AWGPYRSVH
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