| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1067 |
|---|
| Symbol | |
|---|
| ID | 6120692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1152203 |
|---|
| End bp | 1153243 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641649092 |
|---|
| Product | TolA protein |
|---|
| Protein accession | YP_001775656 |
|---|
| Protein GI | 170730223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.251769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCTG ACTCACGCTT GGGCCACTCA CGGCGCCGTG AAGGGATTGT GTTACCGGTG
CTGATGGCCT TATTGCTACA TGGCTTTATT GGGGGGGTGT TTTTGCTTTC TTGGTTATGG
TCCCCGCAAC ATAAGGTGTC TTCTTCTGAT GCTGATTCAA GTATCGAAGC AAGTTTGGAT
GTATCCGTTA ACGATACCCG TATTGCACGT CAAGCGTTGC GTAGCTTGCC AGTTCAAGCT
CCTATGCCGA TGCAACTACC ACTGCAAGAT ACAACTCCAC CACAACCAAT TTTTGCGTTG
CAGCCGCAGA ATGCGCTTAC CTCACCTCAG ACTGAGGCAC AGGAACGCAT TATCCAACCT
GACAAGGTTG ATCAGAAACA AGTTAGCGCA CTCGCTGAAT CGCAAGAGAT GGCTAAACGG
GAGCAGGAAG CCAAGCATCG TCAGGAGCAG ATCGATCTCA CAGAGGAACG CAAACGTCAG
CAACAAGCCG AGCAGAAGTT GCGTTTGGCC CGCCAGCAAC AAGAAATCAT GCGGAAGCAG
GTTGAGGAGC ATGCTCAGAT TGATCGCCTG AAAAAATTGA CTGAATTGCG TAAACGTCGT
GAGCAATTGG AAACACAGAT ACAAAGCGAC GCTAAACAGG CCGATCTAGC CGAACAAAAG
TTGCGTCAGC TAGCTGCTGA ACGTTCTCAG CAATCCTCTA CCTCTCCAGT CAACAACACA
AACGGGGTGC AGGGATCTGG GAAAAACGTT GACAATAAAG GGCTGCGTGA TAAGTACAAA
GCAGCAATTC AGCAGGCAGT GAGTGGCCAG TGGAGCCGTC CACCCTCCGT TCCTCTCGGT
CAGGAGTGCA TGATTCACAT TACCCAGTTA CCTGGTGGGC GTGTACTTAG TGCTGAGGTC
GCACCCGATT GTCCGTACGA TGATGCAGGA CGGCGTTCGA TTGAGAGTGC GGTGATGCGC
GCACAGCCGC TACCTTATCG TGGTTTTGAA CCGGTATTTG AACGTGATGT GTATTTCAAA
TTTATTCCTG AAGACCACTG A
|
|---|
| Protein sequence | MHADSRLGHS RRREGIVLPV LMALLLHGFI GGVFLLSWLW SPQHKVSSSD ADSSIEASLD
VSVNDTRIAR QALRSLPVQA PMPMQLPLQD TTPPQPIFAL QPQNALTSPQ TEAQERIIQP
DKVDQKQVSA LAESQEMAKR EQEAKHRQEQ IDLTEERKRQ QQAEQKLRLA RQQQEIMRKQ
VEEHAQIDRL KKLTELRKRR EQLETQIQSD AKQADLAEQK LRQLAAERSQ QSSTSPVNNT
NGVQGSGKNV DNKGLRDKYK AAIQQAVSGQ WSRPPSVPLG QECMIHITQL PGGRVLSAEV
APDCPYDDAG RRSIESAVMR AQPLPYRGFE PVFERDVYFK FIPEDH
|
|---|
| |