Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1059 |
Symbol | |
ID | 6120684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1145416 |
End bp | 1146150 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641649084 |
Product | hypothetical protein |
Protein accession | YP_001775648 |
Protein GI | 170730215 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCGAG GCCCCTCAAT TGAAGCCCGT AAGAATGCTT CTGACAGCAA ACGCGGCAAG ATTTTCACTA AGATCATTCG TCAAATTGGT GTCGCTGCTC GTGCTGGTGG TGGTGATCCC TATAACAATC CAAGTTTGCG TGTGGTGATA GACAAGGCAT TGGCGTCGAA TATGTCCAAG GATGTTATTG AACGCGCAAT AAAGAAGGCT ATTGGTGAGA TGGAGGGCGT TCAATACGAG GAAGTACGTT ACGAGGGCTA TGCTCCAGGG GGAGTTGCAG TCATTGTTGA CTGTCTGACT GACAATCGGC TGCGTACTGT GTCCGATGTG CGCCATGCTT TCTCCAAATG TGGAGGTAAT ATGGGGGCTG AAGGTTCGGT TGCCTTCATG TTCAAGCGTT TGGGGGTACT CAGCTACGCT CATGCCATTG CTGATGAAGA GCTTATCACC GAGGCAGCAA TTGATGCTGG TGCTGAAGAT GTAATGGTCT ACACACAAGA TGATGAGATT GAGGTCATAA CTACTCCAGA AGCTTTCTCA CGTGTTAAGG AAGAGATGGC TGCGTTAGGT TTGATGCCGT ATCATGCTGA GATTACTTTC CGTGCCGATA GTGACATTGT GGTGGATGGG GATACTGCAA TACAGGTACG TAAGCTCCTG GATATACTGG AAGACTTGGA TGATGTTCAG GACGTGTATT CCAACGTTGA TCAAGTGACG TTGGGCAAGC GTTGA
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Protein sequence | MGRGPSIEAR KNASDSKRGK IFTKIIRQIG VAARAGGGDP YNNPSLRVVI DKALASNMSK DVIERAIKKA IGEMEGVQYE EVRYEGYAPG GVAVIVDCLT DNRLRTVSDV RHAFSKCGGN MGAEGSVAFM FKRLGVLSYA HAIADEELIT EAAIDAGAED VMVYTQDDEI EVITTPEAFS RVKEEMAALG LMPYHAEITF RADSDIVVDG DTAIQVRKLL DILEDLDDVQ DVYSNVDQVT LGKR
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