Gene Xfasm12_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1059 
Symbol 
ID6120684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1145416 
End bp1146150 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID641649084 
Producthypothetical protein 
Protein accessionYP_001775648 
Protein GI170730215 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGAG GCCCCTCAAT TGAAGCCCGT AAGAATGCTT CTGACAGCAA ACGCGGCAAG 
ATTTTCACTA AGATCATTCG TCAAATTGGT GTCGCTGCTC GTGCTGGTGG TGGTGATCCC
TATAACAATC CAAGTTTGCG TGTGGTGATA GACAAGGCAT TGGCGTCGAA TATGTCCAAG
GATGTTATTG AACGCGCAAT AAAGAAGGCT ATTGGTGAGA TGGAGGGCGT TCAATACGAG
GAAGTACGTT ACGAGGGCTA TGCTCCAGGG GGAGTTGCAG TCATTGTTGA CTGTCTGACT
GACAATCGGC TGCGTACTGT GTCCGATGTG CGCCATGCTT TCTCCAAATG TGGAGGTAAT
ATGGGGGCTG AAGGTTCGGT TGCCTTCATG TTCAAGCGTT TGGGGGTACT CAGCTACGCT
CATGCCATTG CTGATGAAGA GCTTATCACC GAGGCAGCAA TTGATGCTGG TGCTGAAGAT
GTAATGGTCT ACACACAAGA TGATGAGATT GAGGTCATAA CTACTCCAGA AGCTTTCTCA
CGTGTTAAGG AAGAGATGGC TGCGTTAGGT TTGATGCCGT ATCATGCTGA GATTACTTTC
CGTGCCGATA GTGACATTGT GGTGGATGGG GATACTGCAA TACAGGTACG TAAGCTCCTG
GATATACTGG AAGACTTGGA TGATGTTCAG GACGTGTATT CCAACGTTGA TCAAGTGACG
TTGGGCAAGC GTTGA
 
Protein sequence
MGRGPSIEAR KNASDSKRGK IFTKIIRQIG VAARAGGGDP YNNPSLRVVI DKALASNMSK 
DVIERAIKKA IGEMEGVQYE EVRYEGYAPG GVAVIVDCLT DNRLRTVSDV RHAFSKCGGN
MGAEGSVAFM FKRLGVLSYA HAIADEELIT EAAIDAGAED VMVYTQDDEI EVITTPEAFS
RVKEEMAALG LMPYHAEITF RADSDIVVDG DTAIQVRKLL DILEDLDDVQ DVYSNVDQVT
LGKR