Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1046 |
Symbol | |
ID | 6120671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1134113 |
End bp | 1134853 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649075 |
Product | superoxide dismutase |
Protein accession | YP_001775639 |
Protein GI | 170730206 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.675298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTTT TGAGACAAGG TCACTTAACA CTCTGCTTGA TTGCTGCATT GCTTGCTTCG TCCCCATCTT TTGCTTCGAC ACAACCACAA ACCGCGCCGT TCACACTGCC GCCACTCCCC TACGCTGTCA GCGCGCTGGA GCCGGCGATT GATACGCAGA CCATGACGTT ACATCACGAC TTCCATCACA AGGCCTACGT AGATAACCTC AATGCTGCAA TCAAGGATAT ACCGACACTC TCCGGAAAAA CGCTGGAGCA ACTTCTGGCC ATCACATCCA CGTTGCCGCC AGTGGTACGA AACAACGCCG GCGGCCACTG GAATCACAGC GAGTTCTGGA AGATGATGGC TCCGGTTGGC AAGGGAGGGA AACCATCGGC AGCGCTGGAA GCACAAATTA AAAAGGACTT TGGTTCACTA GACGCTTTCA AGGAGCGCTT CAACAAAGCC GCAACAGGTC GTTTCGGCTC GGGCTGGGCT TGGATGATAT TGACCAGTAG CGGACTGCAG ATCACATCAA CACCCAATCA GGATAACCCA CTGATGGATG TGGCAGAGGT ACGCGGTCAG CCATTGCTAG CCTTAGATGT TTGGGAGCAT GCGTACTATC TCAAGTACAA GTACAAACGT GCTGATTATC TGAACGCTTG GTGGACAGTT GTGAACTGGA ATGAGGTCAA TCATTTATTC GAAGTGGCAA AAAAGGATCA ACATAAGCGA ATCATTAATC CCCAGCATTA A
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Protein sequence | MFFLRQGHLT LCLIAALLAS SPSFASTQPQ TAPFTLPPLP YAVSALEPAI DTQTMTLHHD FHHKAYVDNL NAAIKDIPTL SGKTLEQLLA ITSTLPPVVR NNAGGHWNHS EFWKMMAPVG KGGKPSAALE AQIKKDFGSL DAFKERFNKA ATGRFGSGWA WMILTSSGLQ ITSTPNQDNP LMDVAEVRGQ PLLALDVWEH AYYLKYKYKR ADYLNAWWTV VNWNEVNHLF EVAKKDQHKR IINPQH
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