Gene Xfasm12_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1046 
Symbol 
ID6120671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1134113 
End bp1134853 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID641649075 
Productsuperoxide dismutase 
Protein accessionYP_001775639 
Protein GI170730206 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.675298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTT TGAGACAAGG TCACTTAACA CTCTGCTTGA TTGCTGCATT GCTTGCTTCG 
TCCCCATCTT TTGCTTCGAC ACAACCACAA ACCGCGCCGT TCACACTGCC GCCACTCCCC
TACGCTGTCA GCGCGCTGGA GCCGGCGATT GATACGCAGA CCATGACGTT ACATCACGAC
TTCCATCACA AGGCCTACGT AGATAACCTC AATGCTGCAA TCAAGGATAT ACCGACACTC
TCCGGAAAAA CGCTGGAGCA ACTTCTGGCC ATCACATCCA CGTTGCCGCC AGTGGTACGA
AACAACGCCG GCGGCCACTG GAATCACAGC GAGTTCTGGA AGATGATGGC TCCGGTTGGC
AAGGGAGGGA AACCATCGGC AGCGCTGGAA GCACAAATTA AAAAGGACTT TGGTTCACTA
GACGCTTTCA AGGAGCGCTT CAACAAAGCC GCAACAGGTC GTTTCGGCTC GGGCTGGGCT
TGGATGATAT TGACCAGTAG CGGACTGCAG ATCACATCAA CACCCAATCA GGATAACCCA
CTGATGGATG TGGCAGAGGT ACGCGGTCAG CCATTGCTAG CCTTAGATGT TTGGGAGCAT
GCGTACTATC TCAAGTACAA GTACAAACGT GCTGATTATC TGAACGCTTG GTGGACAGTT
GTGAACTGGA ATGAGGTCAA TCATTTATTC GAAGTGGCAA AAAAGGATCA ACATAAGCGA
ATCATTAATC CCCAGCATTA A
 
Protein sequence
MFFLRQGHLT LCLIAALLAS SPSFASTQPQ TAPFTLPPLP YAVSALEPAI DTQTMTLHHD 
FHHKAYVDNL NAAIKDIPTL SGKTLEQLLA ITSTLPPVVR NNAGGHWNHS EFWKMMAPVG
KGGKPSAALE AQIKKDFGSL DAFKERFNKA ATGRFGSGWA WMILTSSGLQ ITSTPNQDNP
LMDVAEVRGQ PLLALDVWEH AYYLKYKYKR ADYLNAWWTV VNWNEVNHLF EVAKKDQHKR
IINPQH