| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1036 |
|---|
| Symbol | |
|---|
| ID | 6120661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1125662 |
|---|
| End bp | 1126219 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641649066 |
|---|
| Product | HetI protein |
|---|
| Protein accession | YP_001775630 |
|---|
| Protein GI | 170730197 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2091] Phosphopantetheinyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTGGCTGC GCGGGCGGAC GCGTTGTGAG CGGGGGGAGC CGCAGGCACG GCTTGTCTTC
AGCAAGGCAT TAGGGTGGGA TCCAGAGGCA CTGCCGTTAG GCAGGGATGT GCGTGGCCGT
CCTCGTTTTG CTGGACCTTT GTCAGTCTGG GATATCAGTT GGAGTCATAG CGGCGACTAT
TTGCTATTGG CCCTGGGTTA TGGAGGATGT CTGGGCGTGG ATTTGGAACG TGAGCGCTTT
CGGCCACATT TGCTCGATCT GGCGCAGCGT TTTTTCCATC CGAACGAAAC GGCGGTATTG
GGTACATTGG ATGAGCCAGC ACGGCAGGCG TTGTTCTTCC GCTTGTGGTG TGCCAAAGAA
GCCATTCTGA AGGCTCACGG TGCTGGTATT GCGTTTGGTT TGCACCGCTT ACATTTAGCT
GAGGATGAGG GACATCTGAT GTTGGTGGAG TGTGATGCGG CGTTGGGCGC AGCCATGGCG
TGGAGGATAT ATGAGTGGCA GGCTGCACCG GGCTATCGTG CGGCATTGGC TTGGCGTCCG
TTTGCCACAA TTGAGTAG
|
|---|
| Protein sequence | MWLRGRTRCE RGEPQARLVF SKALGWDPEA LPLGRDVRGR PRFAGPLSVW DISWSHSGDY
LLLALGYGGC LGVDLERERF RPHLLDLAQR FFHPNETAVL GTLDEPARQA LFFRLWCAKE
AILKAHGAGI AFGLHRLHLA EDEGHLMLVE CDAALGAAMA WRIYEWQAAP GYRAALAWRP
FATIE
|
|---|
| |