| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1034 |
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| Symbol | |
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| ID | 6120659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1122748 |
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| End bp | 1124748 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649064 |
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| Product | transketolase |
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| Protein accession | YP_001775628 |
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| Protein GI | 170730195 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.536345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC CCACACGCCG CCAGTTGGCC AACGCAATCC GTTTCCTTGC AGCTGATGCA
GTACAAGCTG CTCATTCTGG GCACCCGGGC ATGCCGATGG GAATGGCAGA TATCGCTGAA
GTTCTTTGGA ACGATTTCCT ACGCCATAAC CCTAACAACC CGAACTGGTT TAACCGTGAC
CGCTTCGTTC TTTCCAACGG TCACGGCTCG ATGTTGCAAT ATGCATTGCT GCATTTAAGT
GGCTATGACC TGCCGTTAGA TGAACTCAAG CGATTCCGTC AGCTGCATAG CAAAACAGCT
GGTCATCCTG AGCGTAGCGA GACCCCAGGG ATTGAGACGA CTACTGGGCC GCTTGGTCAG
GGGTTTGCTA ACGCAGTGGG TTTTGCCTTG GCCGAGAAAC TTCTAGCGCA ACGCTACAAC
CGTCCGGAAC ATCTCATTGT CGATCACCGC ACCTGGGTGT TCATGGGCGA CGGCTGTCTC
ATGGAAGGTA TCTCACATGA AGCAGCCGCG CTGGCGGGTA CCTGGAACTT AGGCAAATTG
ATTTGTTTCT GGGATGACAA CAACATTTCT ATTGATGGCA ATACTGCGGG TTGGTTTACC
GAAGACACTC CAGCACGATT CGAAGCCTAT GGTTGGCATG TAATCCGCGA TATTGATGGC
CATGATGCGG AAAAAATCGC AACCGCAATC CAAGCCGCCG TTGCTCAAGA GAACAAGCCC
TCATTGCTAT GCTGCCGTAC CGTGATCGGA TTTGGCTCAC CAAATAAAGC AGGTAAAGAA
TCTTCGCATG GTGCCCCACT AGGAGCGGAG GAACTGGAGG CCACGCGTAA GATGTTGGAT
TGGCCATACG GCCCGTTCGA GATTCCGTCC GAGATTTACG ATGGTTGGCG TGCTAACGGC
ACAGGCATGC TACGTCAAGC TGAGTGGGAG CAGGCGTTCG ACAACTATGC CCGACAGTAT
CCTAAGGAAG CAGCTGAATT AACCCGGCGC TCCCACGCTG AGTTACCTAC TGATTTTCTC
AGCCAATTGG ATGCTTACAT TGCCAAAGTT CACGCTGCGG GGCCCTGCAT TGCTTCCCGT
AAAGCATCGC AGATGGCGAT TGAAGCATTT GCACCTTTAC TTCCCGAGTT AATTGGTGGC
TCGGCTGACT TGGCACATTC CAATCTAACG TTGTGGAAAG GGAGCCAAAC AGTTGTTGGC
GACGCCCCCA ACGCCAACTA TGCCTATTAC GGTGTACGTG AGTTTGGGAT GAGTGCCATC
GCAAATGGAC TTGCATTGCA TGGCGGCTTT ATCCCCTTCG ACGCGACATT TCTAGTATTC
AGTGATTACG CCCGCAACGC AGTGCGTATG AGTGCATTGA TCCCAGCACA TGTGATTCAC
GTTTACACAC ATGATTCAAT CGGACTTGGC GAAGACGGTC CAACGCATCA GCCTGTTGAA
CACTTAGCCG CACTGCGCTA TATCCCCAAC AATGACGTGT GGCGTCCCTG TGACGCAGTT
GAATCTGCAG TGGCATGGAA GGCGGCTATC ACTCGCAATA ACGGCCCGAG CTGTTTGGTG
TTCAGCCGCC AAAACTTGCC GCACCAACCG CGCCATGATG CACAACTTGA GCAGATTGCA
CGCGGTGGCT ATATCTTGGC TGACGCGGCG AGCAGCATCC CCGACATCAT TTTGATCGCG
ACCGGCTCGG AAGTCAGCCT AGCGATCGAA GCGAAAAAGA CACTTGATGC GATGCAGCTA
AAAACACGCG TGGTCTCGAT GCCATCGACC AATGTGTTTG AACGTCAGCA CCCCACCTAC
CGTGAGTCGG TCCTCCCATC GAAAGTCCAC AAGCGTGTTG CAATAGAAGC TGGCGTCACT
GGTTTTTGGT GGCAGTACGT AGGGTTACAT GGTGCCGTGA TTGGCCTGGA CACCTTTGGT
GCATCAGCCC CAGCGGATGT GTTGTACAAA CATTTTAATA TCACTGCAGA ACACGTTGTC
GAAGTCGCAA AGGCACTTTA G
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| Protein sequence | MTKPTRRQLA NAIRFLAADA VQAAHSGHPG MPMGMADIAE VLWNDFLRHN PNNPNWFNRD
RFVLSNGHGS MLQYALLHLS GYDLPLDELK RFRQLHSKTA GHPERSETPG IETTTGPLGQ
GFANAVGFAL AEKLLAQRYN RPEHLIVDHR TWVFMGDGCL MEGISHEAAA LAGTWNLGKL
ICFWDDNNIS IDGNTAGWFT EDTPARFEAY GWHVIRDIDG HDAEKIATAI QAAVAQENKP
SLLCCRTVIG FGSPNKAGKE SSHGAPLGAE ELEATRKMLD WPYGPFEIPS EIYDGWRANG
TGMLRQAEWE QAFDNYARQY PKEAAELTRR SHAELPTDFL SQLDAYIAKV HAAGPCIASR
KASQMAIEAF APLLPELIGG SADLAHSNLT LWKGSQTVVG DAPNANYAYY GVREFGMSAI
ANGLALHGGF IPFDATFLVF SDYARNAVRM SALIPAHVIH VYTHDSIGLG EDGPTHQPVE
HLAALRYIPN NDVWRPCDAV ESAVAWKAAI TRNNGPSCLV FSRQNLPHQP RHDAQLEQIA
RGGYILADAA SSIPDIILIA TGSEVSLAIE AKKTLDAMQL KTRVVSMPST NVFERQHPTY
RESVLPSKVH KRVAIEAGVT GFWWQYVGLH GAVIGLDTFG ASAPADVLYK HFNITAEHVV
EVAKAL
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