Gene Xfasm12_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1025 
Symbol 
ID6120650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1112116 
End bp1113102 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content51% 
IMG OID641649056 
Producthypothetical protein 
Protein accessionYP_001775620 
Protein GI170730187 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.469684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACATTG CTTTGAAACA GCGACTGATC GGTGCCGTCA TTCTAGTGGC GCTCGCCGTA 
ATATTCTTAC CGTTGCTGGT CAGGGGGCCC GCCCCTGATA GTGGTGTGGC CGATGTGCCC
CTAAAAGCGC CATCTGCCCC CAACGACGCT AAGTTCGAAA CTCGTGAATT GCCTTTACCC
TCACCCACTA CTACAAGCAA TACCACGCAA ATAGGTAATG CACCACTGCA ACCGCCCCCA
AACGTAGTAA AAGAAAGCTC AGATGTCCTT GACGCAAAAA GAACATTGCC ACCTGACGTC
GCAGCCGGTA ACTATGCGGT TAACTTTGGA GCCTACTCCA GCCCTATTGA TGCTAATAAG
GTGATTGTGC GACTTAAACA GGCTCAATTG CCGGGATTCA GTGAAAAGAC TCAGGTCAAC
GGTGCCGCTG CTTGGCTCGT ACGTATTGGC CCATACGCTG ACCAAGCACA GGCCGAAGCA
GTGCGTCTGG AGGCAATCAA GATACGAAGC GACGTTAACG CACGTGTGGT TGTTTTAGAC
GCAAAGGCGG AAAGTCCCGT CGCTAAGCCT CCGGTTTCAA GCACACCTTC ACAATTTAAA
TCAACCTCTT CTGTACCGGT ACAAACTCAA ACTTCTAAAC TACCGGTGAA ACACACTCAA
CCTCCTGCTA CTGGTGCTAC CGCAGCTGCT ACTAAATCGT CCTCCTCACC TACCAAGACA
CCCGTAACAT TCCCCATAGC ACCTAAGACT AGTATCGGTT TCGCCGTGCA ATTAGGTGCA
TTTGTTCGAC TCGAAGACGC TAATGCCTTG TGTGATCGTG CGCGTGCAGC TGGTTTCAAT
GCATTCGTCG AGCAAGTCAA CACTGATCAA GGTTCACTAC ACCGTGTCAG AGTTGGACCA
GTGCCTAAAC GGGAAGCTGC CGATCAACTT AAAGCGCAAG TGGCGGCTAA AATCGGCATT
ATCGGCATGG TACGGTCACA CCCTTGA
 
Protein sequence
MDIALKQRLI GAVILVALAV IFLPLLVRGP APDSGVADVP LKAPSAPNDA KFETRELPLP 
SPTTTSNTTQ IGNAPLQPPP NVVKESSDVL DAKRTLPPDV AAGNYAVNFG AYSSPIDANK
VIVRLKQAQL PGFSEKTQVN GAAAWLVRIG PYADQAQAEA VRLEAIKIRS DVNARVVVLD
AKAESPVAKP PVSSTPSQFK STSSVPVQTQ TSKLPVKHTQ PPATGATAAA TKSSSSPTKT
PVTFPIAPKT SIGFAVQLGA FVRLEDANAL CDRARAAGFN AFVEQVNTDQ GSLHRVRVGP
VPKREAADQL KAQVAAKIGI IGMVRSHP