Gene Xfasm12_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1002 
Symbol 
ID6121486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1082330 
End bp1083346 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content54% 
IMG OID641649035 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001775599 
Protein GI170730166 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTCA ATAATGTCTC GATTGCGGGA CTGGCTCACA TTGATGCCCC GTGTACACTC 
ACGTCGCAGG AAATTAACGC CCGTTTGCAA CCGATGCTTG AGCGGATTGG CATTAAAAGC
GATGTCTTCG CCGATATTGT CGGTATCAAT GCACGCCGGT TGTGGAATAC CAACGTACAG
ACCTCCGATG TCGCAACGAT GGCAGCGCGT AAAGCATTGC AGGATGCAGG GGTGGCTGTG
GACCGTATCG GCTTGGTGGT CAACACTTCG GTGAGTCGCG ATTACCTGGA ACCGTCCACT
GCTTCGATTG TCTCCGGCAA CCTTGGTGTT GGCGAGCAAT GCATTGCCTT CGATGTGGCC
AATGCCTGCC TGGCCTTCCT AAACGGCATG GACATTGCGG GACAAATGCT GGAGCGTGGG
GACATTGATT ATGCCTTGGT GGTTAACGCC GAGACTGCTA ACCGTGTTTA TGAAAAAACG
CTTGAGCGGA TGAGTGCCCC AGGTGTTACC GAGCAGGAGT TCCGCGAGGA AATGGCGGCC
TTAACCCTGG GGTGCGGTGC GGTGGCGATG GTACTGGCGC GTACTGCTTT GGTGCCTGAT
GCACCTCAAT ACAAAGGGGG AGTGACCCGC TCTGCGACTG AATGGAACAA GCTATGTTGC
GGGAATCTGG ATCGTATGGT TACTGACACC CGCTTGATGC TCATTGAGGG GATCAAACTA
GCAAAGAAAA CCTTTGTTGT CGCCAAACAA GTGCTGGGTT GGGTGGAGGA GGAGTTGGAT
CAGTTTGTTA TCCACCAGGT CAGCCGCCCA CACACTGAGG CGTTTATCAA GTCATTCGGC
ATTGATCCTG CCAAGGTGAT GACCATTTTC CGTGAGTACG GCAACATCGG CCCCGCTTCT
GTGCCGATTG TGCTGAGTAA GCTCAAGGAA CTGGGCCGTC TCAAAAAAGG TGACCGCATT
GCCTTGCTGG GTATTGGTTC GGGGCTGAAT TGTTCTATGG CAGAAGTGGT GTGGTGA
 
Protein sequence
MLFNNVSIAG LAHIDAPCTL TSQEINARLQ PMLERIGIKS DVFADIVGIN ARRLWNTNVQ 
TSDVATMAAR KALQDAGVAV DRIGLVVNTS VSRDYLEPST ASIVSGNLGV GEQCIAFDVA
NACLAFLNGM DIAGQMLERG DIDYALVVNA ETANRVYEKT LERMSAPGVT EQEFREEMAA
LTLGCGAVAM VLARTALVPD APQYKGGVTR SATEWNKLCC GNLDRMVTDT RLMLIEGIKL
AKKTFVVAKQ VLGWVEEELD QFVIHQVSRP HTEAFIKSFG IDPAKVMTIF REYGNIGPAS
VPIVLSKLKE LGRLKKGDRI ALLGIGSGLN CSMAEVVW