| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0980 |
|---|
| Symbol | |
|---|
| ID | 6121464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1053683 |
|---|
| End bp | 1054912 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649017 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775581 |
|---|
| Protein GI | 170730148 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAC CCCAGCGTGG CGTGGCTTGG GCGCGTATTG GTGCTGAGCT TGGCTTATTT
TTATTTGGTG CTTTAGCCAT CTGTCTGCCA GTCGGCCTTG CCCCTTTTGG CTTCGTGCTG
GTGACAACGA GTGTGTTGTA CTTTGGCCGA TTGCGTCGTG CCACGTCGGA AATTGCGGCG
CCGCTGCGCA CTTTATTTTT ATTAGCCCTG AGTGTGTTGC TGTTGTCGTT GCTGTCTATC
ATCGTCATGC ACCTGGGGTT GCGTGATTTA GATATCAGGA CACGCTTTCT TCTGTTGCCT
TGGTCCGCTC TTTGGGTGTA TGCGTTGCGA CCTCGCAAGC AATGGTTGTG GTGTGGCGCT
GCTCTAGGTG TATTTGGGGT TCTGCTGCTG GCAGTGATTC AGATATTGCG TGGCGAGACG
CGTGCAGAAG GTTGGGTGAA TGCCATTGTG CTTGCCGACG TCACTATGGC ACTGACCATT
GTGGTGGTGT TCGCGCGCCC TAAGCAAAGT TGGTTACTGC CGTCATTGGT GTTACTGGCG
TGCAGTGCTG TGATTGTGCT CAGTGGTAGC CGTGGGGTTT TGTTAGCAAT GGCCGTGGTG
TTGCTTGTGT TGACCATGAG TGTCCGTTGG GCCAGCTTGC GTGTTCGCTT ATTGTTGCTA
GCTGGCTTGG TGCTAGGTGG AGGTACATTG GCTTTTGAGG TGCCGCAAGT CACTGAGCAA
ATGCGGTTGG TGGAGCTCCA GGCCGATATG CGCCGACTTG AGAGCGGTGA CAGTGATTCT
TCCACAGGCG CGCGTCTGGA GCGCCTTCAA GTTGCTTATG CCACGTTCTT GAGCAAACCA
TTGATGGGTG TTGGGATCGG GCAGTTTGAT CGTGCGATGA CCTTCTTACC GGTATGCCGT
GGTGATGAGT GGTTGGTGCG TTGCCATCTA CGGCACGCTC ATAATGATCT GGCCGAATGG
GCGGCGACTC AGGGGGTCCC TGGATTGTTG GCGATTTTGG CCATTTATGG TGTGCCGTTT
GTGTTGCTAC TGCGTCTGTA CGCGGCGGGT GGCCGTAAGA GTTTTCGTGG CCCAGCAGCG
ACGGGAGTGA TGCTGGTGGT GGCTTACATG TTATGTGGTA TGACCCAGTC GATGTTTTCG
CATCAGATGA GTACAAGTTT CTATGCGGTG GCAGTTGGCG TGTGTATTGG TTTGGCGTTG
CGTGAGGTGA AGTTGCGGGG CGCTTTATAA
|
|---|
| Protein sequence | MLKPQRGVAW ARIGAELGLF LFGALAICLP VGLAPFGFVL VTTSVLYFGR LRRATSEIAA
PLRTLFLLAL SVLLLSLLSI IVMHLGLRDL DIRTRFLLLP WSALWVYALR PRKQWLWCGA
ALGVFGVLLL AVIQILRGET RAEGWVNAIV LADVTMALTI VVVFARPKQS WLLPSLVLLA
CSAVIVLSGS RGVLLAMAVV LLVLTMSVRW ASLRVRLLLL AGLVLGGGTL AFEVPQVTEQ
MRLVELQADM RRLESGDSDS STGARLERLQ VAYATFLSKP LMGVGIGQFD RAMTFLPVCR
GDEWLVRCHL RHAHNDLAEW AATQGVPGLL AILAIYGVPF VLLLRLYAAG GRKSFRGPAA
TGVMLVVAYM LCGMTQSMFS HQMSTSFYAV AVGVCIGLAL REVKLRGAL
|
|---|
| |