Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0943 |
Symbol | |
ID | 6120802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1022438 |
End bp | 1024303 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641648987 |
Product | DNA primase |
Protein accession | YP_001775551 |
Protein GI | 170730118 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGGG CTTGTTCTGA GAAAGCGTTC GGATTGATTG AGTATCCGAT CAGAGAAGTA TTACCCGTGG ACTGGAACGG TCGTGTGCGT GTTGTGCCAA GCATCGTAGT TAATGATGGG TATTTGTTGG CACATGTCTA TGGACGTGAA CCCACCCATT GGAGGGTGTT TGTTCAATGT CAAAATGGCA AATATGAGTG GTTAGAGACA TGTACGACGA AAGCAGCAGC GGACACACTA GTTGATCGCT TGGCAGTGAT CGATGTTTAC TCAAAAGAAC AAGAACATGA ACGGGTAGCT GCGTTTGTTC GCACTCATGA GAAACAACCA CGGCACGACA AAGATACTTT AGCCGCTAAA ACAACTGTTG CTGATAATAC TGTACAGGAA CAGCAACAGC AGCAAGATGT TGCGCTACCG AGTATCACGG TTTCTGAAAA AATATGGCTC GATTTACCGT ATAAGCAGAA AGAGGCAGCG AAACACGCCG CAGGCAATCT TGCTGATGGG AATTGCGCTA TTTCTTGGGA CAAAGAGGAA AAGCGTTGGT ATGCAAGGCC TGGTGCTGAC CTTGAGAAGA TCAAACAATG GTTGCCTAGC CATGAAGCCA AGCCAACAAA TCTAGCAACT AAGAAGACTT GGCTTGCAGT TACTTTTGAG CAGCGTCATG CGGTCAAAGA AATCGGTGGA AAGCCTCCGA ACGGTAACAA TGCAGTTGAT TGGGATAATG CTGCCAAATG TTGGTATGCA AATCCTGGGG CTGATCTTGA TAAGTTGAAG CCGTGGATTG CTACGGAGAT CATGAGTCGG CAAGTTCCGG CACTTTCTCC AGAAAAAGAA TTTGCAGAGA CGTTACGAAG CCTGGGATGT CTCGTGAGTG GTGAACATCC CATCATGGAC GCTAAGAAAC ACCGTATTGA GGTCGAAGGA GACAAAAAGG GGGAAAAGGC TGGTTTTTAT GTCGCTTACC TGGACGGCCA CCCATCCGGC TATATCAAAA ATAACCGTAC TGGCATCGAA TTGAAGTGGA AAAGCAAAGG GTACTTGCTC GATGCAGAGC AAAAGGCCGC AATGCAAGCG GAGGCAGCTG CAAAATTGGC TGCACGCGCA GAGCAGCAAC AACAAGAACA AGAGGCTGTC ACGCAACGTG TCGTAAAGCA GATGGATGAT CTTGTGACTG TTATCGAGCC GACGCCCTAT CTAAAAGCTA AAGGCATCAC GCCACAGGCT GGTATATACA CTGACAGTGA TGGCCAGAAG ACCTACATTC CAGCTATCGA TTCGGATGGT AAGCAATGGA CGATGCAATA CATCCAAGAG GACGGTACGA AGCGATTTGC AAAAGGGGGG CGTAAGGAGG GTTGTTTTCA CCCCATAGGT GGTCTTGCTG CTATCGTAGC AGCGCCCGTG ATCGTCATTG GCGAGGGCTA TGCCACTGTG GCGCAAGTGT CTCAGGCATT GGGTTATGGG ACCGTTGTCG CATTTGATGC TGGCAATCTG GAAGGTGTTG CCAAAGCATT GCACAAGTCT TTCCCAGACA AGCCTATTCT GATAGCCGGT GACGATGATC AGTCTTTACC TAACAATCCA GGAAAGACCA AGGCTCAAGA GGCAGCGCGT GCTGTAGACG GTACGGCGTT CTTCCCAATC TTCGCGCCAG GTGAACAGGC GGATGATCCG AAAGGCTTCA CCGATTTCAA TGATCTTGCC ACTAAGAGTG CGCTCGGTAT CGAAGCGGTT GAACGGCAGG TACATGCGGC TGTTAGCAAG GCTATCGATA ATCATCAGAA ACGTGTTCAG CAGCAGACTC AACAACAAGG GCAACACGAA CAGAAGCAGG AACGTCGACG GCTTCGCGTT CGCTAG
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Protein sequence | MLRACSEKAF GLIEYPIREV LPVDWNGRVR VVPSIVVNDG YLLAHVYGRE PTHWRVFVQC QNGKYEWLET CTTKAAADTL VDRLAVIDVY SKEQEHERVA AFVRTHEKQP RHDKDTLAAK TTVADNTVQE QQQQQDVALP SITVSEKIWL DLPYKQKEAA KHAAGNLADG NCAISWDKEE KRWYARPGAD LEKIKQWLPS HEAKPTNLAT KKTWLAVTFE QRHAVKEIGG KPPNGNNAVD WDNAAKCWYA NPGADLDKLK PWIATEIMSR QVPALSPEKE FAETLRSLGC LVSGEHPIMD AKKHRIEVEG DKKGEKAGFY VAYLDGHPSG YIKNNRTGIE LKWKSKGYLL DAEQKAAMQA EAAAKLAARA EQQQQEQEAV TQRVVKQMDD LVTVIEPTPY LKAKGITPQA GIYTDSDGQK TYIPAIDSDG KQWTMQYIQE DGTKRFAKGG RKEGCFHPIG GLAAIVAAPV IVIGEGYATV AQVSQALGYG TVVAFDAGNL EGVAKALHKS FPDKPILIAG DDDQSLPNNP GKTKAQEAAR AVDGTAFFPI FAPGEQADDP KGFTDFNDLA TKSALGIEAV ERQVHAAVSK AIDNHQKRVQ QQTQQQGQHE QKQERRRLRV R
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