Gene Xfasm12_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0939 
Symbol 
ID6120798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1016582 
End bp1017199 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content50% 
IMG OID641648983 
ProductTetR family transcriptional regulator 
Protein accessionYP_001775547 
Protein GI170730114 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAG CATATACTTC CGCGTCCCAG CTTCGGCAGC CTCAAGATCA TGACGTCCGA 
GATCAGATCG TCAAGGCGGC GACTGAATAT TTCGGTCGCT ACGGCTATGA AAAAACGACT 
GTTTCCGATT TGGCGAAAGC GATTGGCTTC TCTAAGGCCT ACATCTACAG ATTCTTCGAC 
TCCAAACAGG CGATTGGTGA GGTTATCTGT TCGAATCGGC TGAGCATAAT CATAACTAGT 
GTCGATGAAG CCGTCGCCAA CGCTTCAACT CCACCTGAAC AGCTGCGTCG GATGTTCAAA 
ACATTAGTGG AGGCTGGCAA CTATCTGTTC TTCCACGACC GCAAGCTCTA CGACATTGCA 
GCAACCTCGA TCAGCGAGTC TTGGCCGTCA GTTGGCGTAT ACGAAGACCA CCTTAAAGCA 
TTGGTGTTGC AGATCTTGCG AGATGGCCGC GAGTCAGGGG AGTTTGAACG AAAGACCCCG 
CTGGATGAAA CTCTCAATGC CATCTACTTG GTCATGCGTC CGTACATCAA TCCGTTGATG 
TTGCAGCATA ACTTGGACAA TGCCACCGAA ATCACGACCA AACTATCCAA CCTGATATTG 
CGCAGCTTGG CGCCTTAG
 
Protein sequence
MTKAYTSASQ LRQPQDHDVR DQIVKAATEY FGRYGYEKTT VSDLAKAIGF SKAYIYRFFD 
SKQAIGEVIC SNRLSIIITS VDEAVANAST PPEQLRRMFK TLVEAGNYLF FHDRKLYDIA 
ATSISESWPS VGVYEDHLKA LVLQILRDGR ESGEFERKTP LDETLNAIYL VMRPYINPLM 
LQHNLDNATE ITTKLSNLIL RSLAP