| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0934 |
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| Symbol | |
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| ID | 6120793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1007797 |
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| End bp | 1012788 |
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| Gene Length | 4992 bp |
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| Protein Length | 1663 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641648978 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001775542 |
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| Protein GI | 170730109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCAA AGAAGTCTTT ATCGACATCG GTCAAAGGAC CTGCCCAGGA TCCTGCTAAG
CAATCGTTAG TTGGCGATGT TGAGCCGAGA TGCATGGTTA ACCTGGAGTC TGTGTTTGCC
GTACTGCGCG AGCAGTGTCC GGTGTCCATG CAATCGGATG TACAGCGGCT CGGGGCCGCT
TTTTACTGCC GGATGGAAAC GGATGAGTTT GCCAGGCGTA CGCCGGAACA GTGGGCTGCA
TTGGTGATGG GCATGTTGGA GTTTGCACGT GTACGCAGTA GTGGCACGGC GAACGTGCGT
GCGTGTAAAC CTGCGATTCA TGTCCACGGT TGGGACAGCT CCCACACCAT GTTGCAGATT
GTTAACGAGG ATATGCCATT TCTGGTAGAC ACAGTCATCA TGACTTTGGC GGAGTTGGGC
ATTGGTGTGC ATTTGCTCTT TCATCCGGTG ATCGAATTGA CTCGAAACAA TGAAGATAGG
CTGATTGCGG TGGGGGAGGG GATCGCCGAA TCGTTGATGG TGTTGGAGAT CGACCGCCAG
TCGACGGAGC AAATGGCGGT GGTCGAGAAG GCAATACGCA AGGCCTTGGA TCAGGTACGC
GCTGTTGTGG CTGATTGGGG CGCCATGCGT GAGCACATGC TGAGATTAGC CGACGCTATG
GACATGCGCT GTGTGCCGAG CGAGGCACTG CGGCATGAGA TGCAGGCATT TCTACGCTGG
GTTGCGGCAG ATCATTTTAT TTTTTTCGGT TACCGTGAAT ACAGTGTTGC CAAGCATGGT
GCAGAAGCCG TGTTGGCATC GTTGCAGGAG ACTGCCTTGG GATTGATGCG TGCCCAGGAT
GTGTCACCGC CACGCCCAAT GGCGAGTTTT GCAGCTTACC GTCTGAGTCA ATCTGCCGGC
CAAGATGATG CACTGATTTT GACCAAGACC AATGCACGCT CCCCGGTGCA TCGGGCCGGA
TATATGGATT ACATCGGTGT ACTGGAGTTT GATGCTGAAG GACGCATGAT CGGTGAGCGG
CGCTTCCTGG GTTTGTTTAC CTCCAGTGCA TATTACTGCC GCCCTTGGGA GATCCCGTTC
GTACGCCAGC GTTACCAATA CGTGATGAAC AGGTCAGGCC TGACGTTGGA CAGCCATAGC
GGCAAACTTT TGCGCCACAT TCTAGAGACG CTCCCGCGTG AAGAGCTGTT TCAGTCTGGT
GATGAAGCAC TGTATCGCAC TGCAATGGGT ATTCTCGGGT TACATCATCG TGTGCGCAGC
CGTTTATTTT TGCGTTGCGA CAAGTACCAG CGTTTTATCT CAGCGCTAGT GTATGTGCCG
CGCGAGTACT TCAATCAGGA TGTACGTTCG CGTATTGAGG CATTGCTCAA GGATGTTTTG
CATGGTGAAT ACATCGATTC TTCAGTGATA GTGAATGAAT TGTCACCATT GGCACAATTG
CATCTCATCA TCAGGCCGCA AAGTGGCTAT GTGTTGGAAC CCGATGATGC CCAGGCATTG
GAAGAGCGTG TGGCGCATTT ACTGTGTAAC GGCCAAGACG CGCTCCGTGA AGTGCTGGTA
ACGCGTCACG GCGAGAATGT CGGCTTGCGC ATGGCCGCGC TCTATGCACG TGCGTTGCCG
GCGAATTACT TGGAAGAGTC TTCCATCGAG TCTGCGGCAG TGGATGTCGA GCATTTGGCG
GCATTGCAAG GTGCTGACGA TCTGCGTTTG AGCTTGCATG CTTTACCGTG TGCCGGTTCA
CCTGGGCTGC GTTTGAAACT GTACCGTCAC TTGGACGGTA TCCCGCTCTC AGATGTATTA
CCGATGATGG AGAATCTCGG GTTACGGGTG ATTTCCGAAC GGCTATACCG CTTGCATATT
GCCCCGGTTC CAATGTGCAT CCAGGATTTC GAAGTCCAAT CTGCTGTCGG TGTCATTGAT
GTTACTGCTG TGGGGATGGC TTTCGTTGAA GCGTTCGTGC GGATCTGGGA TGGCAATGCT
GAAAATGACG GCTTTAACGG TTTGGTGCTT GCCGCCGGTC TACATTGGCG TCAGGTGGCG
TTGCTGCGTG GCTACTGCAA ATATCTGCTG CAAACTGGAG TCCCGTTCTC ACAAAGTTAC
GTTGAAGCGA CGTTTGCACA GTATCCACTG TTGGCGAGAG TGTTGGTGGA ACTGTTCGAC
GCCCGTTTCA ACCCGGCGAT TGACGATGCC CCCAAACGAT GGAAGGACAA TCAACCACAG
CGTCGAGTGC AGTTAACGGC CCTGGCCCAT GGCGATACAG CTGTTTTAAA AGCATTGGAG
CCAATGCTCG AAGCGAGTTT CAGTGATCGT CACGTCTATC GGGAGACTGT CCATGCGGTG
CTGCTTAAGC TGATGGATCA TGTAGCCAAT GTGGACGAAG ATCGTATCCT GCGCAGCTTC
GTTGGTGTGA TCGATGCGAC CTTGCGTACC AATTATTATC AAACAGGCAA GCAGGGGCAG
CTGGGTTCCT GTATCAGCTT TAAGTTTGAT TCCACGCAGA TACAGGATTT GCCCAAGCCG
CACCCATACC GCGAAATTTT TGTTTACAGC CCCCGTGTGG AAGGCATTCA TCTGCGTTTT
GGTCCTGTGG CTCGTGGTGG TTTGCGCTGG TCTGATCGGC GTGAAGATTT CCGCACAGAG
GTACTCGGTT TGGTGAAAGC ACAGATGGTG AAAAATACCG TCATTGTTCC AGTGGGTGCC
AAGGGCGGAT TTTTCGTGAA GTGCTTGCCT TCCGTTGCTG ATCGCGATGC GATCCAGGCC
GAAGGCATTG CATGTTACAC ACTGTTTATT CAGTGCCTGC TGGATCTGAC GGATAACATT
GTCGATGGTC AGATCGTGCC GCCAGCGCAG TTGGTACGTT ACGATCAGGA TGACCCGTAT
CTGGTGGTTG CGGCCGACAA AGGCACTGCA ACGTTTTCTG ATATCGCCAA TCGTTTGGCG
TTGGAGCATG GTTTTTGGCT GGGTGACGCA TTTGCCTCGG GTGGATCGGT CGGTTACGAC
CACAAAGGCA TGGGCATTAC TGCCCGTGGT GCCTGGGAGT CAGTTAAGCG CCATTTTCGT
GCACTTGGGC GTGATTGCCA GAATGAAGAT TTTCGTTGCA TTGGCGTTGG TGACATGTCA
GGTGATGTGT TTGGTAACGG CATGCTGCTG TCGCGTCATA GTCTTTTGGT GGCGGCCTTC
GATCATCGCC ACATTTTTTT GGATCCGATG CCGGATGCAG CTCTTTCGTT TGCTGAGCGT
GAGCGCTTGT TTAAGCTGCC GCGCTCCAGT TGGGCCGATT ACGATGCTAC GTTGATCAGC
AAAGGCGGCG GCATCTATCC GCGTACTTTG AAGTCGATTC AGATCAGCCC GCAGGTGGCC
GAGGTGCTGG GTTTGGATAA AGGAATCAAG CAACTCTCTC CGAATGTGTT GATCAGCGCG
ATTCTCAAAG CACCCGTGGA TCTGTTTTGG AATGGTGGCA TCGGTACCTA TGTCAAGGCG
AGCAGCGAGA CGCATGCCGA TGTTGGTGAT CGTGCCAATA ATGCTCTACG CGTCAATGGC
CTTGAGCTAC GTTGCAAGGT CGTCGGTGAA GGCGGCAACT TGGGGTTAAC CCAGCTTGGT
CGGATTGAGG CGGCACAGCG CGGTGTGTTG CTCAACACGG ATTTCATCGA CAATTCTGCC
GGCGTAGACA CCTCTGATCA CGAGGTCAAC ATCAAAATTC TGCTGAATGA TGTCGTGCAG
GCCAAGACGC TCAGTTTCGA TGCGCGCAAC GCGCTATTGG CGTCAATGAC TGATGATGTG
GCGCAGTTAG TGTTGTGGGA CAACATCCGT CAAAATCAGG CGTTGAGCTT GATGGAACGG
ATGAGTGTCA AGCGTCTTGG TTCCAAACAG CATTTCATCC GTACCCTAGA GAGGCAGGGA
TTGCTGGATC GGCAGATCGA ATTCCTACCA TCGGACGCTG AGTTATCAGC ACGTAAGGCA
CGTGGTTTGG GTTTGACTCG GCCGGAGCTT GCGGTGTTGT TGTCGTACTC CAAACTGGTT
GCATTTCAGC AATTGCTTGC ATCTGATGTG CCTGAAGATC CTTATCTGTC ACAGGAATTG
CAACGCTACT TTCCGGAGCC GTTGCAGAAG GCGTATGTCC GTGTGATGGA GCAGCATCGT
TTGAAACGCG AGATCATCGC GACGGCGGTA ACAAATACGA CCATTAATCG CATGGGAGCG
ACGTTCCTGA TGCGGATGCA GGAGGACACC GGGCGCAGTA TTGGCGAGGT TGCCAAAGCC
TACACGATGA GCCGCGAGAC GTTGGGGGTG CGTGCCTTGT GGGCTGAGAT TGATGCATTG
GATGGACGGA TCCCCGAGTC GGTGCAGATG GATGCATTAG AGGTGATCTG GCGTTTGCAG
TGGTCATGTG TGCGTTGGTT GCTGTTGCGT CCTGGCCAGA TGCCGGATAT TACTGTGGTG
GTGGAGCGTT ACCGCGGGGC GTTCAACGCT ATCCGTCCGG TGGCTGCGGT GTTGCCAGAG
ATGCAACGTG CGGCGTACGA GGCTAGTTTG CAGGACTGGA AGGAGAAGGG GCTTTCCCAG
ACGTTGGCTC AGCAACTGTC TGAACTGTGT TTCTTGGGAC AGGTGTTTGA CATGATTGAA
TTAGCACATA TGTCCAAGCT TCATCCCGTG GAGGTCTCCA AGGTGCATTT CTGTTTGGGT
GCTGCATTGG GGTTGCCCTG GTTGTTTGCA CACATTGATG CACTGGAAGT GACTGGCCGC
TGGCAGGCGA TTGCGCGCGG CGTGTTGCGT GATGAGTTAG CAGCGCACCA GCGCTCTTTG
TCCGGGCATG TGTTGGCAAT GGCTGGAATG AGCGCCGAGG AAAAAGTTGA CCAATGGATT
GGGCGTGATG ACAGCAGTTT GCGTTTCACA CTGTCGATGT TGGCTGAATT GAACGAGCAG
AAGACGCTGG ATTACCCAAC GCTCTCAGTT GCGGTACAGC GTTTAGGGCA GCTTGCTGCG
CATGGTGCTT GA
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| Protein sequence | MVSKKSLSTS VKGPAQDPAK QSLVGDVEPR CMVNLESVFA VLREQCPVSM QSDVQRLGAA
FYCRMETDEF ARRTPEQWAA LVMGMLEFAR VRSSGTANVR ACKPAIHVHG WDSSHTMLQI
VNEDMPFLVD TVIMTLAELG IGVHLLFHPV IELTRNNEDR LIAVGEGIAE SLMVLEIDRQ
STEQMAVVEK AIRKALDQVR AVVADWGAMR EHMLRLADAM DMRCVPSEAL RHEMQAFLRW
VAADHFIFFG YREYSVAKHG AEAVLASLQE TALGLMRAQD VSPPRPMASF AAYRLSQSAG
QDDALILTKT NARSPVHRAG YMDYIGVLEF DAEGRMIGER RFLGLFTSSA YYCRPWEIPF
VRQRYQYVMN RSGLTLDSHS GKLLRHILET LPREELFQSG DEALYRTAMG ILGLHHRVRS
RLFLRCDKYQ RFISALVYVP REYFNQDVRS RIEALLKDVL HGEYIDSSVI VNELSPLAQL
HLIIRPQSGY VLEPDDAQAL EERVAHLLCN GQDALREVLV TRHGENVGLR MAALYARALP
ANYLEESSIE SAAVDVEHLA ALQGADDLRL SLHALPCAGS PGLRLKLYRH LDGIPLSDVL
PMMENLGLRV ISERLYRLHI APVPMCIQDF EVQSAVGVID VTAVGMAFVE AFVRIWDGNA
ENDGFNGLVL AAGLHWRQVA LLRGYCKYLL QTGVPFSQSY VEATFAQYPL LARVLVELFD
ARFNPAIDDA PKRWKDNQPQ RRVQLTALAH GDTAVLKALE PMLEASFSDR HVYRETVHAV
LLKLMDHVAN VDEDRILRSF VGVIDATLRT NYYQTGKQGQ LGSCISFKFD STQIQDLPKP
HPYREIFVYS PRVEGIHLRF GPVARGGLRW SDRREDFRTE VLGLVKAQMV KNTVIVPVGA
KGGFFVKCLP SVADRDAIQA EGIACYTLFI QCLLDLTDNI VDGQIVPPAQ LVRYDQDDPY
LVVAADKGTA TFSDIANRLA LEHGFWLGDA FASGGSVGYD HKGMGITARG AWESVKRHFR
ALGRDCQNED FRCIGVGDMS GDVFGNGMLL SRHSLLVAAF DHRHIFLDPM PDAALSFAER
ERLFKLPRSS WADYDATLIS KGGGIYPRTL KSIQISPQVA EVLGLDKGIK QLSPNVLISA
ILKAPVDLFW NGGIGTYVKA SSETHADVGD RANNALRVNG LELRCKVVGE GGNLGLTQLG
RIEAAQRGVL LNTDFIDNSA GVDTSDHEVN IKILLNDVVQ AKTLSFDARN ALLASMTDDV
AQLVLWDNIR QNQALSLMER MSVKRLGSKQ HFIRTLERQG LLDRQIEFLP SDAELSARKA
RGLGLTRPEL AVLLSYSKLV AFQQLLASDV PEDPYLSQEL QRYFPEPLQK AYVRVMEQHR
LKREIIATAV TNTTINRMGA TFLMRMQEDT GRSIGEVAKA YTMSRETLGV RALWAEIDAL
DGRIPESVQM DALEVIWRLQ WSCVRWLLLR PGQMPDITVV VERYRGAFNA IRPVAAVLPE
MQRAAYEASL QDWKEKGLSQ TLAQQLSELC FLGQVFDMIE LAHMSKLHPV EVSKVHFCLG
AALGLPWLFA HIDALEVTGR WQAIARGVLR DELAAHQRSL SGHVLAMAGM SAEEKVDQWI
GRDDSSLRFT LSMLAELNEQ KTLDYPTLSV AVQRLGQLAA HGA
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