Gene Xfasm12_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0879 
Symbol 
ID6120738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp951865 
End bp952554 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content52% 
IMG OID641648930 
ProductcAMP-regulatory protein 
Protein accessionYP_001775495 
Protein GI170730062 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000144762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATAG GGAACACTAC GAGTGTGACA ACGGTACGTA ACGCTACTCC GCCTTTAGCT 
CTCGACAATG CGGCGATCGA GCGCTTCTTG GCTCACAGTC ATCGACGCCG CTACCCCAAC
CGAACGGATG TGTTTAGGCC TGGTGATCCT GCTGGAACGC TTTACTATGT TATCAGCGGG
TCGATCAGCA TCATTGCCGA GGAAGACGAT CATCGTGAGC TGATTCTTGG CTATTTCGGA
GCAGGTGAGT TTGTGGGTGA GATGGGTTTA TTCATCGAAT CCGATGCTCG TGAAGTCATC
TTACGTACCC GGACTCAGTG TGAATTGGCT GAGGTAAGTT ACGAGCGCCT GCACCAACTG
TTGCAAGGCA GTTTAGTGAG TGATGCGCCG CGGATTTTGT ATGCGATAGG TATGCAGTTA
TCTAAGCGTT TATTGCTTAC CACCCGTAAG GCGAGTCGTC TGGCTTTTCT GGATGTGGGG
GATCGGATCT TCCGCACCTT ACATGATCTG GCTCGCGATC CAGAGGCAAT GAGTCATCCT
CAGGGTACAC AGTTGAGGGT GTCACGTCAG GAGCTTGCGC GTCTGGTTGG ATGCTCGCGT
GAAATGGCTG GACGTGTGCT TAAGAAGTTG CAAGCGGATG GTCTGTTACA TGCGCGCGGC
AAAACCGTTG TTCTGTACGG AACGCGTTGA
 
Protein sequence
MTIGNTTSVT TVRNATPPLA LDNAAIERFL AHSHRRRYPN RTDVFRPGDP AGTLYYVISG 
SISIIAEEDD HRELILGYFG AGEFVGEMGL FIESDAREVI LRTRTQCELA EVSYERLHQL
LQGSLVSDAP RILYAIGMQL SKRLLLTTRK ASRLAFLDVG DRIFRTLHDL ARDPEAMSHP
QGTQLRVSRQ ELARLVGCSR EMAGRVLKKL QADGLLHARG KTVVLYGTR