Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0871 |
Symbol | |
ID | 6120730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 944820 |
End bp | 945755 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641648922 |
Product | oxidative stress transcriptional regulator |
Protein accession | YP_001775487 |
Protein GI | 170730054 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000180312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC GTGACTTGAA ATATCTAATT GCTCTGGCCG ATTACAAGCA CTTTGGCCGT GCTGCAACTG CATGTTTTGT CAGTCAGCCG ACGCTATCTA CGCAAATCAA GAAGTTGGAA GGCGAGCTCG GCGTGTCGTT AGTCGAGCGT GCGCCGCGTA AGGTCATGAT GACCCCGGCT GGGCGCGAAG CGGCGATCCG TGCGCGTAGC ATTGTTGCCG AGGTTGAGGA AATGAAGGAA GCTGCGCGGC GTAGCCGTGA TCCGGAGGCT GGTGCTGTGC GTTTGGGTAT TTTCCCAACG CTCGGTCCGT ATTTGTTGCC CCACGTAGTA CCGAGTATCC GTTATCGTTT TCCACAATTG GAACTGTTGC TGGTTGAGGA GAAAAGTGAC GAATTGCTCG CACAGTTGCG TGAAGGTAAG TTGGATGCAG CGTTGTTGGC ATTGCCGTTA CATGATGAAC AATTGCACAC CGAATTTTTG TTTGAGGAGC CGTTCGTGTT GGCAGTCCCA GAGGGGCATC CGTTGGCTAC ACGTCGTGAG ATGACGATGG AAGAATTAGC CGACGAACGT TTGTTGTTAC TGCAAGATGG CCACTGTCTG CGTGAGCAGG CATTAGATGT GTGCCATATG ACTGGTGCAT CGGAGAAGTC GGAGTTTCAG GCTACGAGCT TGGAGACTTT GCGACAGATG GTGGTTGCTA ATGTGGGTAT CACGCTGCTG CCGTTGCTCT CAGTCAAGCC GCCGGTAGTC TGTTCGGAAA GTATTCGTCT GATTAATTTT CCTTTGGACA AACAGCCGAG TCGCCGAATC GCTATGGTGT GGCGACGCAG TTCAGCGATG ACGACATTTC TAGAGAGGTT TTCGAGCATG TTCAAGGAAT TGCCAAAGGA GTTGTTTGAC TTGCCTCAGA CTGTGGTGCT GTACAAAGGT CGGTAG
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Protein sequence | MNLRDLKYLI ALADYKHFGR AATACFVSQP TLSTQIKKLE GELGVSLVER APRKVMMTPA GREAAIRARS IVAEVEEMKE AARRSRDPEA GAVRLGIFPT LGPYLLPHVV PSIRYRFPQL ELLLVEEKSD ELLAQLREGK LDAALLALPL HDEQLHTEFL FEEPFVLAVP EGHPLATRRE MTMEELADER LLLLQDGHCL REQALDVCHM TGASEKSEFQ ATSLETLRQM VVANVGITLL PLLSVKPPVV CSESIRLINF PLDKQPSRRI AMVWRRSSAM TTFLERFSSM FKELPKELFD LPQTVVLYKG R
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