| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0868 |
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| Symbol | |
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| ID | 6120727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 937826 |
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| End bp | 941998 |
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| Gene Length | 4173 bp |
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| Protein Length | 1390 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641648919 |
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| Product | surface protein |
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| Protein accession | YP_001775484 |
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| Protein GI | 170730051 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.431588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATTTA TAGCTCCATA TAGTAGTAAA CAGCATGGGA AGGAACCGCT GCATACTATT
TTATTTGCTG CGTTGTCGCT GTCGCTTCCA TATGCTGAAA AAGTTAATGC GCAGGTTTAT
ATTAATGATG GCGTGGATGG GGGATGCCAA AGGATAGTTG ATAACGGAAG CGCATCAGGT
GTTGAGCGGA CAATAGCCAC TCAGTGTAGT GAAGATCCGT GGGCTGTGAC GGGTTACGCT
CGTTTCTTCG GTCCCCCTGG AGCAACTGTT GACCAGGGGA ACGCATCAAG AAGTCTTACG
CTGGGTGGGG TTTTGTATGT CAATTCGGGT CAATTCGGTG TTAATGACGT TTTAAATAAA
ACGTATTCCA TCCGTATGGG CAGTGTGGCG ACAATGAACG CTGCTGTGGG AAGCAACGCC
ATTGCCATTG GTTCGACGCA GACCAGCGCG GCTGATGCAC TGAAAGCGAG CTTGGCAACC
AAAGCAACTG GTGCACGCGC AATTGCAATT GGTGCGAAGG CGTCGGCGGA TGGTGCCGAC
ACAGTTGCGT TAGGTTCTGG AGCAACGGCG GGTACGGGTG CTTCTTCGGT TGCTATTGGT
CTTAATGCCT CGGCAGTCAA TGGTGCCGTT GCGGTTGGTG GGGGAGCGCT GGTTACGGTG
CCAGATGGAG CTGTGGCATT GGGATTGAGT TCGGTTGCTT CTACTGGCAA GGGCCTCTCA
GGGTACGACC CAAAAACAAA AATGATTTCC ACGGACCCTT CAGCGGCCTG GAAAAGCACG
CTGGCAGCAG TCAGTATCGG CGATGTATCT AGTAGCAATT TTAAGACGCG TCAGCTTTCA
GGTTTGGCGG CAGGCACATC AAATACCGAT GCAGTGAATG TTGCTCAGCT TAAGGTCGTT
GACGAGATTG CCAGTAAAGG CTGGAACCTT ACGGCGTCCG GGGCCAACAG TGGCAACGTA
GGTCCAGGAA GTTCAGTGGA CCTGAAAAAC AGCGACAAAA ATCTGACGAT TACAAAAGCG
ATCGGAAGTA ATGATGTGGA ATTCAATTTG AACAAGAATG TCAAAGTTAC AACATTGGCT
GTTGGTGATG CTTTGCTGAA TACCGATGGG ATCGCGTTAG GCACTGATGT CTCGTTGAGC
ACGATGGGTT TGACGATTAC CAATGGTCCT GCGGTGACTG CATCGGGTAT TGATGCGGGC
AGCAAGGTCA TCAGCCATGT TGCGGCGGGT GAGGTGTCGG AGACGTCGAC GGATGCGGTG
AACGGATCGC AGTTGAATGC AGTGCAAGTG CAAGCCAGTC AGCCGGTAAC GTTTAGTGGA
AACGAGGGGT CGGTGAAACG TAGCCTAGGT CAGGCGGTGG TGATCAGTGG TGAGAGCAGT
ACTGCGGGTA CGTATTCAGG TGGGAATTTG AAGAGTGTGG TGGATGAAGC GGCTGGTGCG
ATTCATTTAC AGCTGGCGGA TTCTCCGAAG TTTGGCAATG TGGTGATCAA CAATGGCGGC
AAGATCAGCG GGTTGACGGC AGGGACAGAG GATACGGATG CGGTCAACTT GAGTCAGTTG
AAGTCGATCA GCGATACGGT GGATAAGGGG TGGACGCTGA CGGCGTCAGG TGCCAATGGG
AGCAAAGTGG TATCTGGCGG TGCTGTGGAC CTGAAGAACA CGGATGGGAA TCTGACGATC
AGCAAATCCG ATGATAGCAA TGATGTGGTG TTTAACCTGT CCAAGGATTT CAAAGTGGAT
GGGATGACCT CGGGCACCAC GGTCGTGAAT AACGATGGCG TGAAGGTGGG TAGCGATGTT
GCATTGGGTA CGACGGGTTT GACGATTACC AATGGTCCTG CGGTGACTGC ATCGGGTATT
GATGCGGGCA GCAAGGTCAT CAGCCATGTT GCGGCGGGTG AGGTGTCGGA GACGTCGACG
GATGCGGTGA ACGGATCGCA GTTGAATGCA GTGCAAGTGC AAGCCAGTCA GCCGGTAACG
TTTAGTGGAA ACGAGGGGTC GGTGAAACGT AGCCTAGGTC AGGCGGTGGT GATCAGTGGT
GAGAGCAGTA CTGCGGGTAC GTATTCAGGT GGGAATTTGA AGAGTGTGGT GGATGAAGCG
GCTGGTGCGA TTCATTTACA GCTGGCGGAT TCTCCGAAGT TTGGCAATGT GGTGATCAAC
AATGGCGGCA AGATCAGCGG GTTGACGGCA GGGACAGAGG ATACGGATGC GGTCAACTTG
AGTCAGTTGA AGTCGATCAG CGATACGGTG GATAAGGGGT GGACGCTGAC GGCGTCAGGT
GCCAATGGGA GCAAAGTGGT ATCTGGCGGT GCTGTGGACC TGAAGAACAC GGATGGGAAT
CTGACGATCA GCAAATCCGA TGATAGCAAT GATGTGGTGT TTAACTTGTC TCAGGATCTT
AAAGAGAACA GTGTGACTGT GGGTAACACT CAGGTGAACA AGGATGGTGT GAGGGTGAGC
AATGATGTTT TGCTGAGTTC TAAGGAGTTA GTGATTACGA GCCATTCATC CACTTCATCC
GTCAAGACTT TGGCAAATGG AGAAAGTGTT GTTAACAGGA CGGTTGTGAA TGGCGATGGT
GTGAATATTG ATGATGTTGT TGTTGTTAAT GATCTTGGGT TATCAATTGT CGGTGGGGCG
TCGGTTACGT TGAGTGGTAT CAATGCTGGC AGCCATAAGA TCACTAATGT GACGGCAGGG
ACGGAGGATA CGGATGCGGT CAACTTCAGT CAGTTGAAGT CGGTCAGCGA GGCGGTGGAT
AAGGGGTGGA CGCTGACGGC GTCGGGTGCC AATGGGAGCA AGGTGGTGTC TGGCGGTACG
GTGGATCTGA AGAATACGGA TGGGAATCTG ACGATCAGTA AATCCAGCGA TAGCAATGAT
GTGGTGTTTA ACCTGTCCAA GGATTTCAAA GTGGATGAGG TGACTGCAGG CAATACGGTG
GTGAACACCG ATGGTGTGAA GGTGGGTAGC GATGTTTCGT TGGGTGCAAT GGGATTATTC
ATCGCTAATG GACCTTCGGT GACGGCTTCG GGGTTCAATG CGGGTGACAA AGTCATCAGC
CATGTTGCAG TGGGTATGGC AGATACAGAT GCGGTTAACG TCAGTCAACT GAAGCAGGCA
GTACAGAGTG TGACTGTCAA AGCGACTCGC TATTACAGTA CGAATGATGG TGGCACCCAG
GGAGGTAACT ATGATGGTGA TGGTGCGACA GGCAGTAAGG CTGTCGCGGC CGGTGTTGGT
ACGCAGGCAT CTGGTGAAGG GGCGACAGCG GTGGGATCTG GTGCTGCTTC GAGTGGCAAA
GGTTCTACGG CGATTGGCCG TAATGCGATT GCTAGTGCTG ATGGCAGTGT GGCTTTGGGT
GATGGTGCAA AGGATGGTGG GCGTGGTGCA GAAAGTTACA TTGGGAAATA TTCAGGTGTA
CAGAACAATA CGATGGGAAC TGTTTCGGTA GGTGATGCTG CTAAGGGGGA AACCCGTTCG
ATCAGTAATG TGGCTGATGC TAAGGAGGCG ACGGATGCGG TGAATTTGCG CCAGCTTGAT
GCTGTGGCCC AGAAGTCAAA TCTTCAAACG GATGATATGA GGCATGAGAT CAATAATATA
GAGGATGTTT TTAAGATCAC TAAAGGTGAC AGTACTCCAA GTGTCAAAGG GATGGGGGTC
AATGCGATGG CCATTGGTAC CAATGCTGCA GTTTCAGGTA CAGATAGTGT TGCGTTGGGT
AAGAATACGA ATGTGTCTGC TGATAATGCG GTTGCCATTG GTAACGATTC AGTAGCTGAC
CGCGCAAACA GTGTTTCGGT GGGATCTGCG GGTTCTCAGA GGCAGGTGAC GAATGTGGCT
GCAGGCACTG CTGATACGGA TGCGGTCAAT GTAAGTCAAC TCAATCAAGG CTTGATCACT
GCCAAGCAGT ACACGGATGG GATGGTAGGG AATCTCCGTA GGGAGACTAG CGGGGGTGTG
GCTGCAGCGA TTGCGACGGC AAATCTCCCG CAGGCTTATG TTCAGGGACG AGGGATGACC
TCTGTTGGAG TCAGTAGTTA TCAAGGTCAG TCGGCGATTG CGGTGGGTGT TTCAGCGGTT
TCTGAGAGTG GGCATTGGGT GTTCAAGTTC AGTGGTAGTG CGAATACCCG TAGTCACGTG
GGTGTAGGTG CAGGTGTGGG TTATCAGTGG TGA
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| Protein sequence | MVFIAPYSSK QHGKEPLHTI LFAALSLSLP YAEKVNAQVY INDGVDGGCQ RIVDNGSASG
VERTIATQCS EDPWAVTGYA RFFGPPGATV DQGNASRSLT LGGVLYVNSG QFGVNDVLNK
TYSIRMGSVA TMNAAVGSNA IAIGSTQTSA ADALKASLAT KATGARAIAI GAKASADGAD
TVALGSGATA GTGASSVAIG LNASAVNGAV AVGGGALVTV PDGAVALGLS SVASTGKGLS
GYDPKTKMIS TDPSAAWKST LAAVSIGDVS SSNFKTRQLS GLAAGTSNTD AVNVAQLKVV
DEIASKGWNL TASGANSGNV GPGSSVDLKN SDKNLTITKA IGSNDVEFNL NKNVKVTTLA
VGDALLNTDG IALGTDVSLS TMGLTITNGP AVTASGIDAG SKVISHVAAG EVSETSTDAV
NGSQLNAVQV QASQPVTFSG NEGSVKRSLG QAVVISGESS TAGTYSGGNL KSVVDEAAGA
IHLQLADSPK FGNVVINNGG KISGLTAGTE DTDAVNLSQL KSISDTVDKG WTLTASGANG
SKVVSGGAVD LKNTDGNLTI SKSDDSNDVV FNLSKDFKVD GMTSGTTVVN NDGVKVGSDV
ALGTTGLTIT NGPAVTASGI DAGSKVISHV AAGEVSETST DAVNGSQLNA VQVQASQPVT
FSGNEGSVKR SLGQAVVISG ESSTAGTYSG GNLKSVVDEA AGAIHLQLAD SPKFGNVVIN
NGGKISGLTA GTEDTDAVNL SQLKSISDTV DKGWTLTASG ANGSKVVSGG AVDLKNTDGN
LTISKSDDSN DVVFNLSQDL KENSVTVGNT QVNKDGVRVS NDVLLSSKEL VITSHSSTSS
VKTLANGESV VNRTVVNGDG VNIDDVVVVN DLGLSIVGGA SVTLSGINAG SHKITNVTAG
TEDTDAVNFS QLKSVSEAVD KGWTLTASGA NGSKVVSGGT VDLKNTDGNL TISKSSDSND
VVFNLSKDFK VDEVTAGNTV VNTDGVKVGS DVSLGAMGLF IANGPSVTAS GFNAGDKVIS
HVAVGMADTD AVNVSQLKQA VQSVTVKATR YYSTNDGGTQ GGNYDGDGAT GSKAVAAGVG
TQASGEGATA VGSGAASSGK GSTAIGRNAI ASADGSVALG DGAKDGGRGA ESYIGKYSGV
QNNTMGTVSV GDAAKGETRS ISNVADAKEA TDAVNLRQLD AVAQKSNLQT DDMRHEINNI
EDVFKITKGD STPSVKGMGV NAMAIGTNAA VSGTDSVALG KNTNVSADNA VAIGNDSVAD
RANSVSVGSA GSQRQVTNVA AGTADTDAVN VSQLNQGLIT AKQYTDGMVG NLRRETSGGV
AAAIATANLP QAYVQGRGMT SVGVSSYQGQ SAIAVGVSAV SESGHWVFKF SGSANTRSHV
GVGAGVGYQW
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