| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0861 |
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| Symbol | |
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| ID | 6121423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 930686 |
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| End bp | 931312 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648913 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001775478 |
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| Protein GI | 170730045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0604467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGGA TGACCGGTTT CACCTTGATG GAGGTGCTTT TGGCAACCGT GCTACTGGCC
AGTGGTCTTA CGTTGGCTTT TGTGACGTTG CACTCTGCCA GCATAGTGAG TCGACGCAGT
GAGGCGCTGG CTTCCCGCAA TGAACGCATG AGAGCAGTGG AGTTGTTTTT GCGTCGGCGT
TTGATGGGCG CGTTACCGCT GATGATGGGG GAGGATAGGG AGCGGCACAT GCCGTTGTTG
TTTGTCGGGG AGCCGCAGCG GATGCGTTTT GTCGCTGATG TGCCGGATTA TCTCGGTCGT
GGTGGTCCTT ATGTACACGA TATCAGCGTG GTTCAGAGTG GCGCACAGCA CCAGCTGCGT
ATTGCACTGA CCATGTTGCA ATCTGATGAG ACTGTTAAAG ATGGGCTGTC GGTACCATCG
GAACTCCTTG CTGATGGCTT GCATGAAGTG CATTTCAGCT ACCGTGGTTG GGATCAATCA
CGTCATCAAC TTGGTCCTTG GGTGGCTACT TGGCCGTCTT CGGATCAATT ACCAGTGTCA
GTGGCTGTGC AGATCAAGGA TGACATTGCA CCGTGGCCGA CACTGGTCGT GGTGCTTCTG
CAGTCCAACT CCGATGGAGG GGACTAG
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| Protein sequence | MRRMTGFTLM EVLLATVLLA SGLTLAFVTL HSASIVSRRS EALASRNERM RAVELFLRRR
LMGALPLMMG EDRERHMPLL FVGEPQRMRF VADVPDYLGR GGPYVHDISV VQSGAQHQLR
IALTMLQSDE TVKDGLSVPS ELLADGLHEV HFSYRGWDQS RHQLGPWVAT WPSSDQLPVS
VAVQIKDDIA PWPTLVVVLL QSNSDGGD
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