Gene Xfasm12_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0855 
Symbol 
ID6121417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp923302 
End bp925749 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content53% 
IMG OID641648907 
Productouter membrane protein XadA 
Protein accessionYP_001775472 
Protein GI170730039 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.912116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATCAAATTTA CCGCAAATTC TGGAATCTCT CTTTGGGTTC GTGGAGTGTG 
GCCTCGCATA TGACTAATGA TGGAGGTTGC AGTGATGTTG TTTTACGTCA TTCAGGCGTA
CGAAACCGTA GCTTGGTGCT GGCAATCGGT CTTGCGCTTA CAAGTGTTAC TCATGCCCAA
TCGGTGAAAG GTCCTGCGAT GGTCACCGCG AGTAAGGTCA TGGTGGCTCA TGTGGATAGT
CAGGTAAATC GCACCGCTGA AGATTGGAAA TTCTTCCCCT TTAGCAATAA TAGTATTGCA
ATCGGTTACT TATCTAAGGC TTTTGCGCCG AATGCGATAG CGCTGGGTTA CAACAGCTCT
GTGACTCAGA GTGCCAACAA CGGTGTTGCT CTTGGGAGCA ATAGCACCGT ATCAGGGGTC
AATTCGGTTG CTTTGGGTGC TGGTTCGATA GCTTCAGAGC TTAATGTGAT TTCTGTTGGT
GGTGGTGATG GGGTGACTGG TCCAGCGGTG CGGCGCATTG TGAATGTGGG TGATGGTATT
GGTAATAACG ATGCGGTGAA TAAGTCGCAG TTGGATGGTG TGACGGCATC GGTGAATGAT
GTGGCGGCAT CGGTGAAAAA TATTGCTGGG GCGATTCAAA TCACTGGTAG CGGTGTTGCC
AGTGTCAGTG GTCAGGATAG TACTGCGGCC GGTGCCAGTG CGCAGGCTGC CGGTGATAGC
AGTGTTGCTT TGGGAGCGCG TTCCCGTGCT AACGCTATTG GTTCCAGTGC CTTGGGTGTA
GATGGTCATG CTTTTGGCGC CAACAGTACC GCGTTGGGAG GTCAAAGCAC TGCCATCAGT
GAGGGTGGTA CGTCGTTGGG TTACAACAGT TTTGTTGCCC AGAGTGCGAC CAACGGTATC
GCTCTTGGGA GCAATGCCAT CGTATCAGGG GTCAATTCAG TGGCTCTGGG TGCTGGTTCG
ATAGCTTCAG AGCTTAATGT GATTTCTGTT GGTGGTGGTG ATGGGGTGAC TGGTCCAGCG
GTGCGGCGCA TTGTGAATGT GGGTGATGGT ATTGGTAATA ACGATGCGGT GAATAAGTCG
CAGTTGGATG GTGTGACGGC ATCGGTGAAT GATGTGGCGG CATCGGTGAA AAATATTGCT
GGGGCGATTC AAATCACTGG TAGCGGTGTT GCAAGTGTCA GTCGTAAGGA CAGTACTGCC
GCCGGTGCCA GTGCGCAGGC TGCCGGTGAT AGCAGTGTTG CTTTGGGAAC GCGTGCCACT
GCTAACGCTA TTGGTTCCAT TGTGTTGGGT GTGGACAGTC GTGCCAGAGG GGTCAACAGT
ACGGCACTTG GGCGTCAGAG CAATGCGATT GGTGATGGCA GTGTGTCTCT GGGGTTCAAT
AGTTTTGTTC GTCAGAGTGG TGAGCATGGT GTTGCGTTGG GTACTGATGC CGGTGTTTCT
GGAAAAAATT CCATCGCGCT GGGTTATGGT TCGCGTACTC AAGAAGCTGA GGTGTTGTCA
ATTGGTAGTG GTAATGGCCG CGGTGGTCCG GCGACACGCC GTATTGTTAA TGTCAGTTCC
GGCAATCTAT CGCAGGTGAG CACTGATGCG GTGAATGGTG GGCAGCTCTT CCAGACCCTA
AGTAGCATGG CCAGTATTTT AGGTGGTGGT GCGGCGGTAG GGGCACAAGG TGTGTTGGTT
GCGCCGGTGT ATCAAATACA GGGCAGTAGT TACGGCAGTG TGGGTGCAGC GCTCAAGGCA
CTGGATGGTA AGGTCACTGA TATTGATCAT CGTGTGAATG TGAATAGCAA TCTTGCGGCG
GGGGCTGCTG CGTCTACTCT CAGTGCTTCC AAGCCGGGAT CAACCTCCAA TACGGAGGTT
GTGGGAGTTG CCAAGGTTGT TTCCGGTGCG GCGTTGTCTG ATTCGAGTGT TGCTGCCAAT
GCGCAGGTGT TGTCGAAAGA AAATGGTGTC AGTATTTCGG CGACGGGGGG TAGCGCTCAG
AGTAGGGATG AGGTGCAGAC GAGTTCGGTG GGTACGGATT CGCTAGGTAG CTCGCTCAAT
GCACGGCAGG CGACGATGGC CGTAGACGCG TTGGTAACCC AGGGAGTGAG TAAAACGCAA
TTGGATAACA GTATGGCGGC GGCCAATAGC TACACAGATG CACGGTTCTC GGCGTTGAAC
GATAGTTTCG AGAGTTTGCG TAGTGATGTG AATGGACAGA TGCGTCGGCA GGATCGCCGG
ATCAGTCGCC AAGGAGCGAT GGGTGCGGCC ATGTTGAACA TGGCGACCAG CGCTGCTGGA
ATCCATACCC AAAATAGGGT TGGTGCTGGT GTTGGCTTCC AGAATGGTCA GGCAGCACTT
TCTCTGGGTT ATCAGCGTGC GATCAGTGAT AGGAGCACGG TCACTATCGG TGGTGCGTTC
AGTAGTAGTG ATAGTTCGGT AGGCATTGGC GCGGGTTTCG GCTGGTAA
 
Protein sequence
MKENQIYRKF WNLSLGSWSV ASHMTNDGGC SDVVLRHSGV RNRSLVLAIG LALTSVTHAQ 
SVKGPAMVTA SKVMVAHVDS QVNRTAEDWK FFPFSNNSIA IGYLSKAFAP NAIALGYNSS
VTQSANNGVA LGSNSTVSGV NSVALGAGSI ASELNVISVG GGDGVTGPAV RRIVNVGDGI
GNNDAVNKSQ LDGVTASVND VAASVKNIAG AIQITGSGVA SVSGQDSTAA GASAQAAGDS
SVALGARSRA NAIGSSALGV DGHAFGANST ALGGQSTAIS EGGTSLGYNS FVAQSATNGI
ALGSNAIVSG VNSVALGAGS IASELNVISV GGGDGVTGPA VRRIVNVGDG IGNNDAVNKS
QLDGVTASVN DVAASVKNIA GAIQITGSGV ASVSRKDSTA AGASAQAAGD SSVALGTRAT
ANAIGSIVLG VDSRARGVNS TALGRQSNAI GDGSVSLGFN SFVRQSGEHG VALGTDAGVS
GKNSIALGYG SRTQEAEVLS IGSGNGRGGP ATRRIVNVSS GNLSQVSTDA VNGGQLFQTL
SSMASILGGG AAVGAQGVLV APVYQIQGSS YGSVGAALKA LDGKVTDIDH RVNVNSNLAA
GAAASTLSAS KPGSTSNTEV VGVAKVVSGA ALSDSSVAAN AQVLSKENGV SISATGGSAQ
SRDEVQTSSV GTDSLGSSLN ARQATMAVDA LVTQGVSKTQ LDNSMAAANS YTDARFSALN
DSFESLRSDV NGQMRRQDRR ISRQGAMGAA MLNMATSAAG IHTQNRVGAG VGFQNGQAAL
SLGYQRAISD RSTVTIGGAF SSSDSSVGIG AGFGW