| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0827 |
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| Symbol | hslU |
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| ID | 6121389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 887063 |
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| End bp | 888442 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648880 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001775445 |
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| Protein GI | 170730012 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.198289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTA AGACTGATTT CACTTCCTCA ACCATGACGC CACGCGAGAT TGTGCAGGAG
CTTGATCGCC ATATTGTTGG TCAGCAAGTC GCGAAGCGGT CGGTGGCAAT TGCGCTGCGT
AATCGTTGGC GCCGTATGCA GTTGCCTGAG GAGTTGCGTA ATGAGGTGAT GCCTAAGAAC
ATTTTGATGA TCGGTCCGAC GGGCGTAGGT AAGACGGAGA TTGCACGCCG TTTGGCAACT
CTGGCTAATG CGCCGTTTGT CAAAGTCGAG GCGACGCGTT TCACTGAGGT GGGTTACGTT
GGCAAAGATG TGGAACAAAT CGGGCGTGAT TTGGTTGATA CCGCAGTCAA AATGTATCGT
GAGCAAGCTA AGGTCCGTGT ACGCACTCAG GTTGAGGAGT ACGCTGAGGA GCGCATTCTT
GACGCGTTAT TGCCGCGTCG TAGCGTTGGT ATTGGTTTTG ATGTTGATGC CGATGTTATA
CGTCAAGAAC CCTCTGCCCA TGACAGTGAG ACCAGGGCGA AGTTCCGTCG TATGTTGCGC
AGCGGTGAGT TAGAAGATCG CGAGATTGAG TTGGACGTTG CTGTCAACGT GAGTATGGAC
ATTATGACTC CTCCTGGTAT GGAGGAAATG GGTCAGCAGT TGCGTCAGAT GTTCTCCAAT
ATTGGGGGAG GCAAGTCTCA GAAGCGTAAG CTGACGATCA AGGCGGCGCG CCCGTTATTA
ATCGAAGAAG AGGCGGCTAA GCTGGTCAAC GAAGACGAAA TCCGTGCTGC AGCGATCGAA
GCTTGCGAAC AGAATGGGAT CGTCTTTATT GATGAAATCG ATAAGGTCGT TAAACGTGGT
GATACTGTTG GCGGCGGTGA TGTGAGTCGC GAAGGTGTGC AGCGCGATTT GCTGCCATTG
GTAGAGGGGT CGAATGTGTC GACCAAGTAC GGCACGATCA GGACCAACCA CATTTTGTTC
ATTGCTTCCG GTGCCTTTCA CCTCACCAAG CCAAGCGATT TAATTCCGGA GTTGCAAGGC
CGTTTCCCGA TTCGGGTGGA GTTGGATGCG CTGAGTAAAG CGGATTTTAT CCGTATCCTG
ACAGAGCCGA AGGCGGCGCT CACTAAGCAG TATCAGGAAT TGTTGAAAAC GGAAGGTGTA
TCGCTTGATT TTACAGAGGA TGCGATTGAC CGTATTGCCG AGATTGCTTA TTTGGTCAAC
GAGCGTCAGG AGAATATCGG TGCGCGGCGT TTGCACACGG TGTTGGAGCG ATTGTTGGAA
ACGCTGAGTT ATGAGTCTCC GGATCGTGAT GGCGAGTCCG TTACGGTCGA TGCCGATTAT
GTCAATGCGC ATTTGGGGGA ATTAGTGAAG GATCCAGATC TGAGCCGTTA CATTTTGTAA
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| Protein sequence | MPSKTDFTSS TMTPREIVQE LDRHIVGQQV AKRSVAIALR NRWRRMQLPE ELRNEVMPKN
ILMIGPTGVG KTEIARRLAT LANAPFVKVE ATRFTEVGYV GKDVEQIGRD LVDTAVKMYR
EQAKVRVRTQ VEEYAEERIL DALLPRRSVG IGFDVDADVI RQEPSAHDSE TRAKFRRMLR
SGELEDREIE LDVAVNVSMD IMTPPGMEEM GQQLRQMFSN IGGGKSQKRK LTIKAARPLL
IEEEAAKLVN EDEIRAAAIE ACEQNGIVFI DEIDKVVKRG DTVGGGDVSR EGVQRDLLPL
VEGSNVSTKY GTIRTNHILF IASGAFHLTK PSDLIPELQG RFPIRVELDA LSKADFIRIL
TEPKAALTKQ YQELLKTEGV SLDFTEDAID RIAEIAYLVN ERQENIGARR LHTVLERLLE
TLSYESPDRD GESVTVDADY VNAHLGELVK DPDLSRYIL
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