| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0808 |
|---|
| Symbol | |
|---|
| ID | 6121370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 866994 |
|---|
| End bp | 868151 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641648861 |
|---|
| Product | N-acetylglucosamine-6-phosphate deacetylase |
|---|
| Protein accession | YP_001775426 |
|---|
| Protein GI | 170729993 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTT CTTCTGGAGT CGCCGGATTC ATCAATGGCC GTGTCCTGAC CGATACAGGG
TTCCGTCATG ATCTGGCGGT GCTATTGCGT GGTGGATGCA TTCAAGCACT GCTGCCGCAT
GATGATCCGC GGGTGACGGA GGGGGCGCAG TGGGTGGACT TGCGGGGAGG TCTGTTGCTG
CCTGGGTTTA TCGATATTCA GGTGAATGGC GGCGGCGGCG TGCTGTTCAA TAATGCGCGT
GATGTGGATG GCTTGGCCAC AATTGCGCGT GCGCACCGTC GCTACGGGAC GACGGGACTG
TTACCCACAT TGATTAGTGA CACTGTGGAG GTGATGGCTG AGGCCATTGC TGCCACGCGT
GCCGCGATTG CTCAGGGGGT ACAGGGAATC CTCGGGATTC ACTTGGAAGG CCCTTACCTC
AATCCCCTGC GTAAAGGGAT CCATGACCAC ACTCAGTTCC GTGTGCCGCA GTTGCATGAG
CTGATGCGGT GCACGGCATT GGATAACGGG GTGACTCTGG TGACGTTGGC GCCTGAGCAG
GTGCCGGTTG AGATGATCCG TGTTTTTGTC GAGCGTGGTG CGATCGTCTT TGCCGGGCAT
ACGGCAGCGA CGTATGAGCA AGTGCGGGCT GGCATCGCAG CGGGTGTCAC AGGGTTTACG
CATCTGTACA ACGCGATGTC GCAGTTAGTC GGGCGCGAGC CGAATGTGGT GGGTGCTGCG
CTGGAAGATC CGAATACATG GTGCGGGATC ATCGTTGATG GCGTACACGT ACATCCGGCG
AGTCTGCGTG TGGCCTTAGC CGCCAAGCCG CGCGGTAAGG TGCTGCTGGT GACCGATGCG
ATGCCACCAG TTGGCAGTGA CAGTGTTCAC TACGATCTCT ATGGTGAAAC GATTACGGTG
ATGGATGGTG TGGTCCGTAA TGCGGCTGGT GCGTTGGCGG GTGCCGCGCT GGATATGGCA
ACGGCGGTGC GCAATACGGT GCATTGGTTG GGTGTTGATT TGGCTGAGGC TGTGCGCATG
GCCTCGACCT ATCCGGCGCA GTGCATCGGG TTAGGGGATC GTCTGGGGAG GATTGCGCCT
GGTTATCAAG CCGACCTGGT ATGGGTTGAC GACGACGTGC AGGTACAGGG CACGTGGATT
GCTGGTGTGG GCGCTTGA
|
|---|
| Protein sequence | MGASSGVAGF INGRVLTDTG FRHDLAVLLR GGCIQALLPH DDPRVTEGAQ WVDLRGGLLL
PGFIDIQVNG GGGVLFNNAR DVDGLATIAR AHRRYGTTGL LPTLISDTVE VMAEAIAATR
AAIAQGVQGI LGIHLEGPYL NPLRKGIHDH TQFRVPQLHE LMRCTALDNG VTLVTLAPEQ
VPVEMIRVFV ERGAIVFAGH TAATYEQVRA GIAAGVTGFT HLYNAMSQLV GREPNVVGAA
LEDPNTWCGI IVDGVHVHPA SLRVALAAKP RGKVLLVTDA MPPVGSDSVH YDLYGETITV
MDGVVRNAAG ALAGAALDMA TAVRNTVHWL GVDLAEAVRM ASTYPAQCIG LGDRLGRIAP
GYQADLVWVD DDVQVQGTWI AGVGA
|
|---|
| |