| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0805 |
|---|
| Symbol | |
|---|
| ID | 6121367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 863588 |
|---|
| End bp | 864877 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641648858 |
|---|
| Product | glucose/galactose transporter |
|---|
| Protein accession | YP_001775423 |
|---|
| Protein GI | 170729990 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCAG CCCGGTTTCC GAGTTCTACT GTTTCCATTG CTATTGTCGG TGTGTTGTTC
TTCATTATCG GTTTTCTGAC CTGGGTCAAT GGACCGCTGA TTACGTTTGT GCATCTTGTC
TTTGATCTGA ATGAGGTCGA TGCCTTCTTG GTGCTGATGG TGTTCTACCT GTCTTATTTC
TTTCTCGCCT TGCCCTCAGC ATGGATTCTC AAGTGCACAG GGTTGAAAAA AGGCTTGGCG
TTGAGTTTGC TGTTGATGGC TGTAGGCGCA GTCGTCTTTG GTGAATTTTC GACACAACGG
TATTACGCAG GCGCATTGGC CGGCTTGTTT GTGATTGGCA GTGGTTTAGC CTTGCAGCAA
ACTGCGGTCA ATCCTTACAT CAGCATTCTG GGGCCAATAG AGAGCGCGGC GCGACGTATT
GCGGTGATGG GGATTTGTAA CAAGGTCGCC GGTATCTTGG CGCCGTTGGT CATTGGTTCC
CTGGTGCTGC ATGGTGTTGG CGATTTGTCG ATGCAAGTTG CAACTGCCGA CCCGGCGACG
AAGGAACAAC TGCTTGCCGC CTTTGCCGCA GAGATTCATA CACCATATCT CATCATGGCC
GGTTTGTTGG CAGTGCTTGC GGTGGGCGTG TTGTTTTCTC CGCTGCCGGA GTTGCAGCCT
GCTGACGTCA ATCGTGTTTT ATCCGGCGAT ACCACGCAAA AGACCAACAT CTTTCAGTTC
ACGCACTTGT GGCTTGGGGT GTTGTGCATG TTCGTTTATG TGGGTGTGGA GGTGATGGCT
GGCGACGCAA TCGGCACCTA TGGTCATGCA CTCGGCTTGC CTTTGGACCA GACCAAACTG
TTCACCTCAG CAACATTAGG AGCGATGTTG CTTGGTTACA TGATCGGTTT GTCAGTGATT
CCAAAGATGA TTTCTCAAGA ACGTTATTTG AGTTTATCGG CGGTGTTGGG CGTCCTGTTC
TCTATCGGTG CGGCACTGAC GCATGGGTAT GTATCGGTGG CTTTTGTTGC TGCATTGGGC
TTTGCCAATG CGATGATGTG GCCAGCCATT TTCCCATTGG CAATCAATGC GTTGGGTCGT
TTTACCGAGA CAGGTTCAGC GTTGTTGATT ATGGGGATTT CCGGTGGCGC GATCATCCCG
CAGCTTTTCG CCTCTCTGAA ACAGTACCTT GACTTCCAAC TGGTGTTCGC TGGGTTGATG
GTGCCTTGTT ATCTGTACAT TTTGTTTTAT TCCTTGATTG CTGGAGCTAT CAAGGGTCGC
AGTGTGCAAC GTTTAGCCCT CGGGAAATGA
|
|---|
| Protein sequence | MMPARFPSST VSIAIVGVLF FIIGFLTWVN GPLITFVHLV FDLNEVDAFL VLMVFYLSYF
FLALPSAWIL KCTGLKKGLA LSLLLMAVGA VVFGEFSTQR YYAGALAGLF VIGSGLALQQ
TAVNPYISIL GPIESAARRI AVMGICNKVA GILAPLVIGS LVLHGVGDLS MQVATADPAT
KEQLLAAFAA EIHTPYLIMA GLLAVLAVGV LFSPLPELQP ADVNRVLSGD TTQKTNIFQF
THLWLGVLCM FVYVGVEVMA GDAIGTYGHA LGLPLDQTKL FTSATLGAML LGYMIGLSVI
PKMISQERYL SLSAVLGVLF SIGAALTHGY VSVAFVAALG FANAMMWPAI FPLAINALGR
FTETGSALLI MGISGGAIIP QLFASLKQYL DFQLVFAGLM VPCYLYILFY SLIAGAIKGR
SVQRLALGK
|
|---|
| |