| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0796 |
|---|
| Symbol | |
|---|
| ID | 6121358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 854702 |
|---|
| End bp | 856069 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641648851 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001775416 |
|---|
| Protein GI | 170729983 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.24208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACGAC AGCGCTTTCC GACTCTTCAG CATGATTTGC TTGGTGTGGT TCCTCTCTTG
CAGCCACTGG CCGAGCGCAT GCGTCCTCGT ACTCTTCATG AGATGGTAGG ACAGAAGCGC
TTGCTTGCCC CAGATCGTGC ATTGCATCGT GCGGTGGCTT CCGGGAATGT GCATTCCATG
ATTTTGTGGG GACCGCCAGG GTGCGGCAAG ACGACATTGT CATTGCTGTT AGCGCATTAC
ATTGATGCAG AATTTCGGGC AGTCTCGGCT GTTCTTTCGG GGTTGCCGGA GGTGCGTCAG
ATCTTGGCTG AGGCTGCGCA GCGTTTTTCT GAAGGACGCC GCACCGTCTT GTTCGTGGAC
GAAGTGCATC GTTTTAACAA GATGCAGCAG GATGCGTTTC TGCCGCATAT CGAGCGTGGT
TCCATTATTT TCGTTGGTGC CACTACTGAG AATCCATCCT TCGAATTGAA CTCGGCGTTA
CTGTCGCGTT GCCGTGTCCA CGTGTTGGAG GCAGTGTCGT CACAGGATAT CGTTGTGGCA
TTGCAGCGGG CGTTGCAGGA TACGGAGCGG GGTTTGGGTG GGCAGAAGAT TGAAGTGTCT
GAAGCCTCTC TGTTGGAGAT TGCCAAGGCT GCAGATGGTG ACGTGCGTCG TGCGCTCACC
TTGTTGGAGA TTGCTGCTGA GCTTGCCCAG GATGAGGATG AGCAGATAAC CGCTGACTTG
CTTTCGCAAG TGCTTGCCGA TCGTAGTCGG CGCTTCGACA AACGGGGGGA GCAGTTCTAT
GACCAGATTT CGGCCTTGCA CAAGAGTGTA CGTAGTTCCA ACCCGGATGC GGCATTGTAT
TGGTTGCTGC GTATGCTGGA TGGTGGTTGT GATCCTATCT ACTTGGCCCG GCGCTTGACC
CGCATGGCGA TTGAGGATAT CGGTTTGGCT GATCCGCGTG CACAGTCGAT GGCTCTGGAG
GCTTGGGACA TCTATGAGCG GTTGGGTAGC CCGGAGGGAG ATCTGGCGTT CGCGCAGTTG
GTGCTGTACT TGGCAAGTAC AGCAAAATCG AATGCTGGCT ATGTTGCGTT CAATGTGGCC
AAGGAGGACA TTCGCCAGAC GGGTACTCAG GATGTTCCGC TACATCTGCG CAATGCACCG
ACCAGACTCA TGAAAAGTCT CGGTTACGGT ATCGAGTATC AGTACGATCA TGATGCTGAG
AACGGTGTTG CGCTGGAACA GACTTGTTTT CCCGATGCGC TGGGGGAGCG TATTTACTAC
CAACCGGTAT CCCGCGGTCT GGAGATTAAG CTGAAGGAGA AGTTGGACTG GTTGCGTGCA
GCACGTGCTC AGATTCAAGC GGATAAGCCG CAGCGGCCGC GTGCATAG
|
|---|
| Protein sequence | MTRQRFPTLQ HDLLGVVPLL QPLAERMRPR TLHEMVGQKR LLAPDRALHR AVASGNVHSM
ILWGPPGCGK TTLSLLLAHY IDAEFRAVSA VLSGLPEVRQ ILAEAAQRFS EGRRTVLFVD
EVHRFNKMQQ DAFLPHIERG SIIFVGATTE NPSFELNSAL LSRCRVHVLE AVSSQDIVVA
LQRALQDTER GLGGQKIEVS EASLLEIAKA ADGDVRRALT LLEIAAELAQ DEDEQITADL
LSQVLADRSR RFDKRGEQFY DQISALHKSV RSSNPDAALY WLLRMLDGGC DPIYLARRLT
RMAIEDIGLA DPRAQSMALE AWDIYERLGS PEGDLAFAQL VLYLASTAKS NAGYVAFNVA
KEDIRQTGTQ DVPLHLRNAP TRLMKSLGYG IEYQYDHDAE NGVALEQTCF PDALGERIYY
QPVSRGLEIK LKEKLDWLRA ARAQIQADKP QRPRA
|
|---|
| |