| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0783 |
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| Symbol | mnmA |
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| ID | 6120545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 840192 |
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| End bp | 841331 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648838 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001775403 |
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| Protein GI | 170729970 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAC CCCGGATCAT CGTCGCCATG TCCGGCGGAG TAGATTCATC AGTCGCAGCG
TGGCGCTTGA ACAGTCAACG CGAAGCCATC GCCGGATTAT TCATGCGAAA CTGGACTGAC
GACGGAAATG GTCAGTGCCA CGCCGAAGAA GATCGCCGCG ACGCCGTCGC CGTTTGCGGC
ATCCTTGGTA TCGCTTTTCA CTTCCGTGAT TTCTCACACG AGTACTGGCA GGAAGTGTTC
ACACACTTCC TTGCCGAATA CGCCAATGGG CGCACCCCTA ATCCCGACGT CCTTTGCAAC
CGCGAAATCA AATTCAAGCA TTTCCTGGAA ACAGCACGCG AACTTGGCGC CGACCGCATT
GCCACCGGTC ACTACGCCAG GATCGAACAT TATCGCCAAC GTTGGCACCT GTTAAGAGGC
GCCGACCGCA GCAAAGACCA AAGTTATTTC CTGCACCAAC TTGGTCAGGA ACAATTAGCA
GCGACACTAT TCCCAATCGG TGACTTGGAA AAACAACAGC TACGCCAACT GGCACACCAG
ACAGGCCTCC CTACCCATGC CAAAAAAGAC TCAACTGGGA TCTGCTTCAT CGGAGAACGC
AACTTCCGTG AGTTCCTCAA GCAATACCTG CCAGCACAAC CGGGAGAAAT CCGCGATCCA
CAAGAACAAC GGATTGCCGA GCACCCCGGC GTGTTCTATT TCACTCTCGG TCAACGTCAG
GGCTTGAATA TCGGTGGAGT GCGCAACCGC CCCCCTTCCC CCTGGTACGT CATCGGCAAA
GACTTAGCAA CCAACGTACT TTACGTGGAC CAACATCGTG ACAGCCCCTT CTTACAGTCA
CGCTGGCTGC GCTCGGAACC GGCACACTGG GTGTCAGGAT CACCGCCAGC CCACACCTTT
ACCTGCACCG CACAAACACG CTACCGCCAA GCTGATGAAC CTTGCAAAGT CACAGTACGC
AACGACGGCA GCCTTGACGT AGATTTCACA CGAACACAAT GGGCAGTCAC TCCGGGACAG
TCACTGGTAC TGTACGACGG CAATGAATGC CTAGGTGGCG CAGTGATCGC CACCACAGAC
GCACCGTTAG AACGCAAGCG GGCGCGTAAT CTTTCCAAAA CTGAGAATGT GCTGCAATGA
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| Protein sequence | MNTPRIIVAM SGGVDSSVAA WRLNSQREAI AGLFMRNWTD DGNGQCHAEE DRRDAVAVCG
ILGIAFHFRD FSHEYWQEVF THFLAEYANG RTPNPDVLCN REIKFKHFLE TARELGADRI
ATGHYARIEH YRQRWHLLRG ADRSKDQSYF LHQLGQEQLA ATLFPIGDLE KQQLRQLAHQ
TGLPTHAKKD STGICFIGER NFREFLKQYL PAQPGEIRDP QEQRIAEHPG VFYFTLGQRQ
GLNIGGVRNR PPSPWYVIGK DLATNVLYVD QHRDSPFLQS RWLRSEPAHW VSGSPPAHTF
TCTAQTRYRQ ADEPCKVTVR NDGSLDVDFT RTQWAVTPGQ SLVLYDGNEC LGGAVIATTD
APLERKRARN LSKTENVLQ
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