Gene Xfasm12_0743 details

Gene Information

• Locus tag: Xfasm12_0743
• ID: 6120505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 802267
• End bp: 802761
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641648801
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001775366
• Protein GI: 170729933
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.323458
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCGTG GTATCAATAA AGTCATCCTC GTCGGTAACC TCGGTAACGA TCCGGATATC 
AAATACACCC AAGGTGGTAT GACGATCACT ACCATCAGCT TGGCGACAAC CAGTGTTCGT 
AAGGACAAGG AGGGCAATAC CCAGGAGCGG ACCGAATGGC ACAGGGTCAA GTTTTTCGGA 
AAACTCGGTG AGATTGCCGG GGAATATCTA CGTAAGGGAT CACAGTGCTA TATCGAAGGG 
AGCATTCGCT ATGACAAGTT CACTGGCCAG GATGGTCAGG AGCGCTATGT TACAGAGATT 
GTTGCTGATG AGATGCAAAT GTTGGGTGGC CGTAGCGATG GTGGCGGTAT GGGCGGGGGC 
GGTGAGCGCC CACAGCGTCA AACATCGCAG CGTCAGGATT ACGCCCCACG TCGCCAGGCC 
CGTCAGCCGT CACAGTCGCC GCAATCTTCA CCGCCGCCGA TGGACGATTT CGCTGATGAC 
GATATTCCTT TCTAA 

 

Protein sequence

MARGINKVIL VGNLGNDPDI KYTQGGMTIT TISLATTSVR KDKEGNTQER TEWHRVKFFG 
KLGEIAGEYL RKGSQCYIEG SIRYDKFTGQ DGQERYVTEI VADEMQMLGG RSDGGGMGGG 
GERPQRQTSQ RQDYAPRRQA RQPSQSPQSS PPPMDDFADD DIPF