| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0736 |
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| Symbol | |
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| ID | 6120498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 788459 |
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| End bp | 792895 |
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| Gene Length | 4437 bp |
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| Protein Length | 1478 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641648794 |
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| Product | helicase, ATP dependent |
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| Protein accession | YP_001775359 |
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| Protein GI | 170729926 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.336405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTGTC ATGCGATCTT CTGCAATTTA CGATTGATGA GCGTTATCGA ACAGAATATT
TTGGGCCAAT TGCGTCAGTA TCGTCGTGCG ATTGACGATG CGATGACCCG TGATCGTGGC
AGGTTGCTGG GCCTATGGTC GCGTTGGCAG AGTCAACCGC ATGATCATGA GGCGCGTGCT
AACTTCCAGC GGGTGTTATC TGCATCACGG GCACAGCGTC AGGTCCGTGA GAATAATCAG
CCAGTGGTCA CGGTGGATAC CCGTTTACCT ATTGCACAGG AAGCAGAGCG CATTGTCGCG
CTGATCCGGG CGCATCCTGT GGTAATCATT GCTGGTGAAA CTGGTTCGGG AAAGACCACG
CAATTACCGA AGTTGTGTCT GTCCGCTGGA CGTGGCATTG CCGGTACGAT CGGGTGTACG
CAGCCACGGC GTATTGCAGC GCGTGCGGTG GCAACGCGGG TGGCTGAGGA GCTGCAAACG
CCCTTGGGAA TGGTGGTGGG CTTTCAGGTG CGTTTTACCG AGAAGGTCAG TGATGCCTCA
AGGATCAAGT TCATGACCGA CGGTATTTTG CTGGCGGAGG TTGCCAGTGA CCGTTGGTTG
TCAGCCTATG ACACGATCAT TATTGATGAA GCCCATGAGC GCAGTCTCAA TATTGATTTT
TTACTCGGTT ATCTCAAGCA GTTACTGAAA AAGCGTGCTG ATTTGAAGGT GATCGTGACT
TCGGCGACGA TTGACACGGC ACGCTTTTCC AAGCATTTTG ATGATGCGCC GGTGATTCAT
GTGGCTGGAC GCACCTACCC GGTGGAGGTG CGTTACCGTC CGTTGGATGC GATGTGGGCT
TCTGATGATC GCCTTGGGGA ACCCTACGGC GGAACTGAGT CCCCGGCTGT GAATCGTTGG
GTGGGAGGAT CTGGAGGTGA CGGCGCGCTG TCAAAGCCCA TCGTGGCGGT GCCTCAAGAG
GATCAGCGTA CTGTCAATGA TGCGATTGTG GCGGTGATCG ACGAGATCAC CCGTGAGGAC
CCGCACGGTG ATGTATTGGT GTTTCTGCCG GGTGAGCGTG AGATTCGTGA GCTGTATCGG
GTACTGGAGC AGCGTAAGTA TCGTGAGACG GAACTGCTGC CGTTATACGC GCGGTTGTCG
GCTCGCGATC AAGATCGGGT GTTCAACCCC GGCTCTGGGC GTCGCCTGGT GCTGACGACC
AACGTTGCTG AAACATCATT GACGGTGCCA CGGATCCGCT ATGTGATCGA TCCGGGCTAT
GCGCGCGTGA AGCGCTACAG TGCGCGCCAG AAGTTGGACC GGTTGTACAT TGAGCCGATC
AGTCAGGCCA GTGCCAACCA GCGTGCCGGC CGCTGTGGCC GCATTGCCGA TGGTGTCTGT
TACCGGCTTT ATAGTGAGGC AGATTTCCTC GTACGGCCGG CATTCACCGA TCCTGAAATT
CGGCGCTCCT CCCTGGCCGG GGTGATTTTG CGCATGTTGC AGTTGGGCCT GGGACGGATT
GGGGGGAGTG CTGCTTCCTT GAGCGAGCCT GTTTCAGGGC CGGAGCAGCA GCGCACCTCC
TGGATCATTG AAAGTTTCTC GTTTCTGGAG CCGCCTGATG AACGGGCGGT TGCCGATGGC
TGGCAACAAT TGGTCGAATT GGGGGCGGTG GATAGTCAGC ATGCATTGAC TACGATTGGG
CGCGAGATGG CACGGTTGCC GGTGGACGTG AAGTTGGCGC GCATGCTGGT TGCTGCGCGC
CAGCACGGCT GTGTGTATGA AATGACGGTG ATCGCGGCTT TTCTGGGGGT CCAGGATCCA
CGCGAGCGTC CTCCGGATGC GCGTGAAGCG GCCGACAATG CGCATGCGAG GTTTGCCGAT
GCGCGTTCGG AGTTCGTTGG CATTTTGCGT TTATGGGAGG CTTACCGCCA GATCCGTGGG
CATGTGACTC AGTCCAAGTT GCGCCAGTGG TGCCAGCGTC ATTTTCTGGG CTTTCTTCAC
ATGCGCGAGT GGTGCGAGTT GCAGCTGCAA TTGTCGCTGT TGTGTGCGGG GGAGCAGGCG
GAGCAGCCAC GTAAGGGGCG AGCGGCGGCG GCCTTTCCGA AGGAGGGATG CTTACCGTCT
CAGCGATCAA ACCCAGGGGC CGAGGCAGGG AAGGTGAACG AGTTACCTTC AAGTACGACC
GTGTTGCAGG CACTGTTAGC GGGGCAGGGG ACCTCTACTC AGAGTGAACA TCGTGGTAAT
ACACCGAGTC GTGGTCAGCT GCATCGTGCG GCGCGCTTGG CGCGCGAGTG TAGCGCGGTG
CCCAAGGTTA CTCAGAACAC CCAGAGTGTG AAGGCGGTTG CAGGGCAGAG TGTTTCTAAT
GCCGGTATGC AGGCGCAGTT TGTGGTGACG CCTAATGATG CACCGCATAT CGGTGAGCGT
GAGCGTGCGG CTGCCTATCA GGCGTTGCAT CGTGCGTTGC TGACTGGGTT GCCGATCCAG
ATTGGCCATC GTACCGATAA GGGAGATTTT CAGGCGCCGC GCCAGCGCCG TTTTATGTTG
TTTCCTGGTT CGATGTTGGC GAAGAAGCCG CCACCGTGGG TGCTCGCAGC GAACTTGCTG
GATACACAGA AGGTGTGGGG CTTGACGAAT GCTGCGATTG AGCCTGATTG GGTGATTGCT
GAATTGCCGC ATTTGTTGAT GCGCAAGCAT TTCAATCCGC ATTGGTCCCG TACCCAGGGC
CGAGTGCTGG TGTCTGAGCA GATTAGTCTG TTTGGGTTGG TGTTGGCGCC GAAGAAGCCG
ATGCACTATG GCCGCATTGA TCCAGTGGCG GCGCATGATC TTTTTGTACG CCAAGGGTTG
GTGACGGGGG AGATCAACAC GCGTGCCGGT TTTGTTGCTG ACAATCTCAA GGTGTTGGAG
CAGGCGCACG AGGAGGAGGC TAAGTTGCGT CGTGCCGGTA TTGTGGCCGA TGAGGATTGG
CAGGCGCGTT GGTATTTTGA CCGGGTGCCG AGTGACATCC ATACAGCCGA TGCACTGGAT
TCCTGGTGGA AGGGGCTGCC AGTGGAGAAG CGGCACGGTC TGTATTGGTC ATTGATCGAC
TTGTTGCCTG GCGAAGGGGG GGAGGAGGAT CGTTATCCGA AGTATTTTGC ACTCGGGGAT
GTGAGGTTGC CGCTGCACTA TTCGTTTGAT CCAGGTGCAG TGGATGACGG TGTCACTTTG
GATGTGCCCT TGCATCTGCT TAATGCGCTG GATCCGGTAC GGTTGTCGTG GTTGGTGCCT
GGTTTTGTTG CCGATAAAGC GGCGGCCCTG ATCCGTTCGC TACCAAAGGC GTTACGCCGC
AGTTATGTGC CGGCGCCAGA TTTTGCCCAT GCATTTGCTC AAGCGTTCCA GCAGCCTTCG
GCTGATGAGA TGCGTGGTGA GTTGGCACGC TTTTTGTCGC GTATTACCGG GGTACGGGTG
GCGGCGATCG ATTTTGATGA ACAGACATTG GAACCTTATC TGCATCTGCG TGTGCGTTTG
CATGATGAGT CTGGTCAGGT TTTGGCGGAG TCGCGCGATT TTGATGCGTT GCGTGCCCGT
TTTGGCAGCC ACTCGGGCGA GGCGTTCGTA GCCCGTGCAG GGCGCACGCT CATCATGGAG
GAGCTACGCG AGTTTCCTGC TGTGTCGATT CCACTTCAGC TTACCGGTGA GGCTGGGGTT
CCGATGTACC CGGCGTTGGT TGACGATGGT GAGATGGCGG CGTTACGGAT TTTTGCTGAT
CCCACTGAGG CCGCACAGGT GCATCCCCAT GGCGTACGGC GGCTCTTGGA GATCGCCTTG
GCCAACAAGA TCAAGCAGGC GCGCAAGCAG TTGCCGGTGT CTTCCAAAAG TGGGCTGTTA
TATGCGGCCA TTGAGTCAAA AGAATGTTTG CGTGATGACC TTGTCAAGGC GGCATTGAAT
GCGGTGTTGG CTCATGGGTT GGAGTCGATC CGTGATCCTG TTGCGTTTGC GCAGTGCCGT
GATGTGGCGG CGCAGCAGCT TTTTTCTGAG GCGATGGCGC GACTCAGTTT GGCCGAGGAG
ATTTTGGCTG CCGTGGCTGA GCTGAAGCCG TTGCTGGAAG CGCCGTTAAT GGGGTGGGCG
CGTGGCAATC TGGATGACAT GGAACGGCAG TTGGCGCAGT TGGTGTATCC CGGTTTTTTG
CGTCAAACAC CCGCCGATGT GTTGACGCAG TATCCGCGCT ATCTGAAAGC GATGATGATG
CGCAGCGAGC GCGCTAAGCG CGACCCGTCG CGCGATCAGG CGCGTATGCT GGAATTCAAG
CCATTTTTAG ATGCTCTGGA AGTGGCAATG GCACAGGGTG TCTCCGACAC ACCGGGGTGG
GAGACATTGC GTTGGGATGT GGAGGAGTTG CGTGTTTCAC TGTTTGCCCA GGAATTGGGG
GTACGCTCGG GGATTTCTGT CAAGAAATTG GCGCAACGTT TGGCTGCGTT GCGTTGA
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| Protein sequence | MYCHAIFCNL RLMSVIEQNI LGQLRQYRRA IDDAMTRDRG RLLGLWSRWQ SQPHDHEARA
NFQRVLSASR AQRQVRENNQ PVVTVDTRLP IAQEAERIVA LIRAHPVVII AGETGSGKTT
QLPKLCLSAG RGIAGTIGCT QPRRIAARAV ATRVAEELQT PLGMVVGFQV RFTEKVSDAS
RIKFMTDGIL LAEVASDRWL SAYDTIIIDE AHERSLNIDF LLGYLKQLLK KRADLKVIVT
SATIDTARFS KHFDDAPVIH VAGRTYPVEV RYRPLDAMWA SDDRLGEPYG GTESPAVNRW
VGGSGGDGAL SKPIVAVPQE DQRTVNDAIV AVIDEITRED PHGDVLVFLP GEREIRELYR
VLEQRKYRET ELLPLYARLS ARDQDRVFNP GSGRRLVLTT NVAETSLTVP RIRYVIDPGY
ARVKRYSARQ KLDRLYIEPI SQASANQRAG RCGRIADGVC YRLYSEADFL VRPAFTDPEI
RRSSLAGVIL RMLQLGLGRI GGSAASLSEP VSGPEQQRTS WIIESFSFLE PPDERAVADG
WQQLVELGAV DSQHALTTIG REMARLPVDV KLARMLVAAR QHGCVYEMTV IAAFLGVQDP
RERPPDAREA ADNAHARFAD ARSEFVGILR LWEAYRQIRG HVTQSKLRQW CQRHFLGFLH
MREWCELQLQ LSLLCAGEQA EQPRKGRAAA AFPKEGCLPS QRSNPGAEAG KVNELPSSTT
VLQALLAGQG TSTQSEHRGN TPSRGQLHRA ARLARECSAV PKVTQNTQSV KAVAGQSVSN
AGMQAQFVVT PNDAPHIGER ERAAAYQALH RALLTGLPIQ IGHRTDKGDF QAPRQRRFML
FPGSMLAKKP PPWVLAANLL DTQKVWGLTN AAIEPDWVIA ELPHLLMRKH FNPHWSRTQG
RVLVSEQISL FGLVLAPKKP MHYGRIDPVA AHDLFVRQGL VTGEINTRAG FVADNLKVLE
QAHEEEAKLR RAGIVADEDW QARWYFDRVP SDIHTADALD SWWKGLPVEK RHGLYWSLID
LLPGEGGEED RYPKYFALGD VRLPLHYSFD PGAVDDGVTL DVPLHLLNAL DPVRLSWLVP
GFVADKAAAL IRSLPKALRR SYVPAPDFAH AFAQAFQQPS ADEMRGELAR FLSRITGVRV
AAIDFDEQTL EPYLHLRVRL HDESGQVLAE SRDFDALRAR FGSHSGEAFV ARAGRTLIME
ELREFPAVSI PLQLTGEAGV PMYPALVDDG EMAALRIFAD PTEAAQVHPH GVRRLLEIAL
ANKIKQARKQ LPVSSKSGLL YAAIESKECL RDDLVKAALN AVLAHGLESI RDPVAFAQCR
DVAAQQLFSE AMARLSLAEE ILAAVAELKP LLEAPLMGWA RGNLDDMERQ LAQLVYPGFL
RQTPADVLTQ YPRYLKAMMM RSERAKRDPS RDQARMLEFK PFLDALEVAM AQGVSDTPGW
ETLRWDVEEL RVSLFAQELG VRSGISVKKL AQRLAALR
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