Gene Xfasm12_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0713 
Symbol 
ID6120475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp764103 
End bp765008 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content51% 
IMG OID641648773 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_001775338 
Protein GI170729905 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTC GGTTGCGGGA TTATTGGGAT CTGACCAAGC CCAAGGTGGT GGCATTGATT 
GTGTTCACGG CTTTGGTTGG GATGTTTCTG GCTATCCCTG GTATGCCCAG TGTTGTACAG
ATCCAGAGTG GGGCACTTGG ATTTTTAGGC ATTTGGTTGG CGGCGGCGGC GGCGGCGGCA
ATCAATCAGC TTCTGGATGC AAAAATCGAT GCGCAGATGG CACGTACTTC ATGGCGTCCG
CTGGTTGTTG GCAAGGTACG CCCTGTGCAA GTGTTGGTTT TTGCGGGGGT GTTGATCACG
TTGTCGATGA CGATTTTGAC TCTTTGGGTC AATCTTATTA CGGCAGTGCT GACGTTTACT
TCGTTGATTG GGTATGCAGT GATTTACACC GTGTATCTTA AGCGTATGAC GTCGCAGAAC
ATTGTGATTG GTGGTTTGGC CGGCGCGATG CCGCCTATGC TGGGCTGGGC TGCAGTCACG
GGGTTGTCGA CAGCGGCGGA TTGGATTAAT GCATCATTGT TGGTAGCCAT TATTTTTGTG
TGGACGCCGC CGCACTTTTG GGCATTGGCT ATCTTTCGCC GTGCTGATTA CGCCAAGGCA
TCCATTCCGA TGTTGCCGGT GACCCATGGG GTGCAACATA CATCCCGTCA GATCTTGTTG
TATACGGTGA TTCTGAGTGT GGTAACGCTA CTGCCGGTGG CGACCGGGAT GAGCGGGGTA
TTTTATCTGG GGACTGCTTT GGTGTTGGAC GCTGTGTTTC TTTGGTATGC CTGGCGTCTG
CTTGATCCAC CTGATGAATT ATTTGCGATG AAAACGTTTG GTTATTCGAT CGTGTATTTG
ATGGCGTTAT TCGCGTTTCT GATGTTTGAT CATTGGCTGA GGCTAGCGGA TTTTTATTGG
AATTAG
 
Protein sequence
MAARLRDYWD LTKPKVVALI VFTALVGMFL AIPGMPSVVQ IQSGALGFLG IWLAAAAAAA 
INQLLDAKID AQMARTSWRP LVVGKVRPVQ VLVFAGVLIT LSMTILTLWV NLITAVLTFT
SLIGYAVIYT VYLKRMTSQN IVIGGLAGAM PPMLGWAAVT GLSTAADWIN ASLLVAIIFV
WTPPHFWALA IFRRADYAKA SIPMLPVTHG VQHTSRQILL YTVILSVVTL LPVATGMSGV
FYLGTALVLD AVFLWYAWRL LDPPDELFAM KTFGYSIVYL MALFAFLMFD HWLRLADFYW
N