Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0713 |
Symbol | |
ID | 6120475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 764103 |
End bp | 765008 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641648773 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_001775338 |
Protein GI | 170729905 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCTC GGTTGCGGGA TTATTGGGAT CTGACCAAGC CCAAGGTGGT GGCATTGATT GTGTTCACGG CTTTGGTTGG GATGTTTCTG GCTATCCCTG GTATGCCCAG TGTTGTACAG ATCCAGAGTG GGGCACTTGG ATTTTTAGGC ATTTGGTTGG CGGCGGCGGC GGCGGCGGCA ATCAATCAGC TTCTGGATGC AAAAATCGAT GCGCAGATGG CACGTACTTC ATGGCGTCCG CTGGTTGTTG GCAAGGTACG CCCTGTGCAA GTGTTGGTTT TTGCGGGGGT GTTGATCACG TTGTCGATGA CGATTTTGAC TCTTTGGGTC AATCTTATTA CGGCAGTGCT GACGTTTACT TCGTTGATTG GGTATGCAGT GATTTACACC GTGTATCTTA AGCGTATGAC GTCGCAGAAC ATTGTGATTG GTGGTTTGGC CGGCGCGATG CCGCCTATGC TGGGCTGGGC TGCAGTCACG GGGTTGTCGA CAGCGGCGGA TTGGATTAAT GCATCATTGT TGGTAGCCAT TATTTTTGTG TGGACGCCGC CGCACTTTTG GGCATTGGCT ATCTTTCGCC GTGCTGATTA CGCCAAGGCA TCCATTCCGA TGTTGCCGGT GACCCATGGG GTGCAACATA CATCCCGTCA GATCTTGTTG TATACGGTGA TTCTGAGTGT GGTAACGCTA CTGCCGGTGG CGACCGGGAT GAGCGGGGTA TTTTATCTGG GGACTGCTTT GGTGTTGGAC GCTGTGTTTC TTTGGTATGC CTGGCGTCTG CTTGATCCAC CTGATGAATT ATTTGCGATG AAAACGTTTG GTTATTCGAT CGTGTATTTG ATGGCGTTAT TCGCGTTTCT GATGTTTGAT CATTGGCTGA GGCTAGCGGA TTTTTATTGG AATTAG
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Protein sequence | MAARLRDYWD LTKPKVVALI VFTALVGMFL AIPGMPSVVQ IQSGALGFLG IWLAAAAAAA INQLLDAKID AQMARTSWRP LVVGKVRPVQ VLVFAGVLIT LSMTILTLWV NLITAVLTFT SLIGYAVIYT VYLKRMTSQN IVIGGLAGAM PPMLGWAAVT GLSTAADWIN ASLLVAIIFV WTPPHFWALA IFRRADYAKA SIPMLPVTHG VQHTSRQILL YTVILSVVTL LPVATGMSGV FYLGTALVLD AVFLWYAWRL LDPPDELFAM KTFGYSIVYL MALFAFLMFD HWLRLADFYW N
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