| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0712 |
|---|
| Symbol | |
|---|
| ID | 6120474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 762937 |
|---|
| End bp | 764100 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641648772 |
|---|
| Product | cytochrome oxidase assembly protein |
|---|
| Protein accession | YP_001775337 |
|---|
| Protein GI | 170729904 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.809899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAT TCGTCCGGCC ATTACTGTTC CGGCATTTCC ACCGTATGGC TTGGTTAGCC
GCATTGTTTA CTGCCAGCAC AATCATGTTT GGTAGTTTTG TGCGCTTATC TGATGCTGGT
ATGAGTTGTC CTGATTGGCC GACGTGCTAT GGCCGTATCA CTTGGCCGCA GACGGTCGCG
GAGGCAAATG CTCATGCTGC CAGTCAGATC CGCCCATTGG AGATGTATAA AGTCTGGCGT
GAGCAGGTGC ATCGTTTCTT GGCTGGTATG TTGGGCGTTG AGGTATTAGT GCTGTCGCTG
TTGGCTGCGC GTCGCCGTAG GTTCAGTGTC GTGCAAATCT TCAGTGCGGT TGTGTTGGTG
GTGGTGTCGA TTCAGTTGTA CATGGCTGGT CAGCATGCCG GAGCAATGGC GGCGGCGTTG
TTAGGTGAGG TGATCCTACT GTTGGCTGCG CTGCGCTGGA ATAACCAAGA TTTGTCTCGG
GCTGCTGTCC TGACTTTGGC AGTTGTGATT TTCCAAGCAT TGTTGGGGAT GTGGACGGTC
ACGTTATTGC TGAAGCCGAT TGTCGTGATG GGTCACTTGC TTGGTGGTTT GCTGATGTTT
GCGTTGCTGG TGTGGATGGC TTGGCGGGCG ACTCACTTGC CGATCACTTT GGTAGATGCC
ACTAAGGTGC GTTGGTGGCT GCGTTGGGGT GTGGTGATAT TGGTGTTGCA GATTGCCCTG
GGGGGGTGGG TCAGCGCTAA TTACGCGGCG CTGGCGTGTG GGGGGGGCGC TTGGTTGGTA
GACAATTTCC CGCGTTGTGT GGGTGAGTGG TGGCCGCCGC ACGACTTCAC TGAGGGCTTC
ACTCTGTTCC GTACGATTGG TGTGGATTAT GAGGGCGGTG TGCTTGATGG TGCATCGCGG
ATTGCGATCC AGATGATGCA TCGGTTGTGG GCGATTGTGG CTTCTGTCTA TCTGGTGTGG
TTGGCGTGGC GTTTATCTCG TGAGCCCGGC ATGTTGACTT GGGCGTTAGC GTTAGCTTTT
CTGGTGGTGG TGCAAGTGAT GCTTGGTGTG CTCAACGTTA AATTGGTGGT TCCTCTGGTG
GTGGGGGTGA TGCACAACGG CAGTGCGGTG GCATTGCTTT TCGTATTAGT TTCTTTGCTC
GCACGGCTGC GTGCTCCGGA GTGA
|
|---|
| Protein sequence | MDSFVRPLLF RHFHRMAWLA ALFTASTIMF GSFVRLSDAG MSCPDWPTCY GRITWPQTVA
EANAHAASQI RPLEMYKVWR EQVHRFLAGM LGVEVLVLSL LAARRRRFSV VQIFSAVVLV
VVSIQLYMAG QHAGAMAAAL LGEVILLLAA LRWNNQDLSR AAVLTLAVVI FQALLGMWTV
TLLLKPIVVM GHLLGGLLMF ALLVWMAWRA THLPITLVDA TKVRWWLRWG VVILVLQIAL
GGWVSANYAA LACGGGAWLV DNFPRCVGEW WPPHDFTEGF TLFRTIGVDY EGGVLDGASR
IAIQMMHRLW AIVASVYLVW LAWRLSREPG MLTWALALAF LVVVQVMLGV LNVKLVVPLV
VGVMHNGSAV ALLFVLVSLL ARLRAPE
|
|---|
| |