| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0705 |
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| Symbol | |
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| ID | 6119390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 756421 |
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| End bp | 758670 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648767 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001775332 |
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| Protein GI | 170729899 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.965779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC TGACTCGTCC CTTCTTCCAT GGCTTCGAAC AGATGCCACT GCGCGAATAC
GCCGAACGTG CCTATCTTGA TTATTCGATG TATGTCGTAC TTGATCGCGC GCTCCCCTTT
ATCGGAGACG GTCTCAAGCC GGTACAGCGG CGCATCATCT ACGCCATGCA CGAATTGCGG
CTCAATCCAA AGGCAAAACC CAAGAAGTCT GTACGTGCGG TTGGGGACGT GATCGGTAAG
TACCACCCAC ACGGCGACTT GGCCTGTTAC GAAGCACTCG TACTGATGGC ACAACCGTTC
TCATACCGTT ACCCGCTGAT CGAAGGGCAA GGCAACTTTG GCTCTTCCGA CGATCCAAAA
TCATTCGCAG CAATGCGCTA CACCGAGTCC AAACTCACCC CCATCTCTGA GATCCTACTC
AGTGAACTAA GCGAAGGTAC AGTCAATTGG ATCACCAACT TCGACGGTAC CTTGGAAGAA
CCTGCATGGT TGCCGAGCCG CCTCCCACAC CTGTTACTTA ACGGCACCAC TGGCATCGCG
GTCGGCATGG CAACCGACGT ACCACCGCAC AATCTCAACG AAATCACCAG CGCGCTGATT
CACCTGCTTG ACAACCCAAA CGCCACTATT GCCGCGCTGT GCCAATACAT TCGCGGCCCT
GACTACCCAA CGGCTGCCGA GATCATCACA CCACCCAGTG ACCTGCAAAA TCTCTACGAG
ACAGGCAATG GCAGCGTGCG TACCCGTGCC ACCTACCATA AAGAAGACGG CAACGTGGTG
ATCACCTCGT TACCTTACCA AGTGTCACCT TCCAAAGTAA TCGAACAGAT CGCCCAGCAA
ATCCGTTCCA AAAAGCTACC TTGGTTGGAC GGCGAAGGGG TACGCGATGA ATCCGACCAC
AAAAACCCGG TGCGCATCGT GCTGTTCCCA CGTTCCCAAC GGATTGATGT GGAACAACTC
ATGGGCCACC TATTCGCAAC CACCGATCTA GAAAAAAGCC ATCGGGTGAA CCTCAACGTG
ATCGGCCTGG ACGGCCGCCC GCAAGTCAAA CCCCTGAAAC AACTGCTCAG CGAATGGCTC
AGTTTTCGCA GCGACACTGT CACCCGCCGT CTCAAGTATC GACTACAAAA AGTTGAGAAC
CGCCTACACC TGCTGGAAGG CTTACTGATC ACCTTTCTCA ACCTTGACAA GGTGATCCAC
ATCATTCGCA ACGAGGACGA ACCCAAGCCA GTCCTGATCG CACGCTTTGG TCTGTCAGAT
GCGCAAACAG AATACATCCT CGACACCAAG CTACGCCAAC TCGCGCGCCT TGAAGAAATG
GCGATTCGCA GTGAACAAGA CGCACTGACT AAAGAACGTG ACGAGATCAA TGTCATCCTG
GATAGCGACG TCCAACTTAA AAAACTAATC AAGGACGAAT TATTGGCAGA TGCCAAGACA
TTCGGCGATG CGCGCCGTGC GCCGCTTGTC GCACGCCAAG CGGCACAGGC CATTGATGAA
AGCGAACTGG TCGCTAGCGA ACCGATGACC GTGGTGCTCT CGGAGAAAGG CTGGATTCGA
GCGGCCAAAG GCCACGACGT CGATCCAAGC GGGATGTCCT ACCGTGAAGG TGATCGCCTT
TTGGCAGCCG TGCGCACCCG CAGCACCCAT CAAGTCTCCT TCCTCGACTC CGAAGGACGT
GCCTATTCAA CACTGGTGCA TACCCTACCC TCGGCACGCG GCAACGGTGA ACCACTGACG
GGACGCTTTT CGCCCGCCCC TGGTGCTTCA TTCCAAGCGA TGGCCAGTGC CGACAACGAC
AAATTATTCG TGTTGGCCTC CTCTCACGGC TACGGCTTCA TCACCCGGTT CGAAAATCTC
ACCGGACGAA ACAAAGCCGG CAAAGCCATG ATTCATCTCA CACCTGGCGC CCAGGTCATG
GGACTAGCTC CGCTGACCGA CGTGCAACAT GACCGCATTG TCGCGGTGAC CAGCGCCGGC
AACCTGCTAG CCATCGCAGC AAGCGAACTC CCGGAACTAG ATAAAGGCAA GGGCAACAAA
CTGATTGATA TTCCAAAAAC CAAACTGGCC ACTGAACGCC TAGTCGCTGT CATCGCAGTC
GCTTCGAGTC ACACCCTACT GCTCTATAGC GGCGAACGCA CAATGCACCT TTCATTTAAA
GATTTGGAGG CTTACCTTGA TACACGCGGT AGCCGCGGCC AACTACTGCC AAGAAGTTGG
CATAAAATCG ACACACTCGA TATCCAGTAA
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| Protein sequence | MTDLTRPFFH GFEQMPLREY AERAYLDYSM YVVLDRALPF IGDGLKPVQR RIIYAMHELR
LNPKAKPKKS VRAVGDVIGK YHPHGDLACY EALVLMAQPF SYRYPLIEGQ GNFGSSDDPK
SFAAMRYTES KLTPISEILL SELSEGTVNW ITNFDGTLEE PAWLPSRLPH LLLNGTTGIA
VGMATDVPPH NLNEITSALI HLLDNPNATI AALCQYIRGP DYPTAAEIIT PPSDLQNLYE
TGNGSVRTRA TYHKEDGNVV ITSLPYQVSP SKVIEQIAQQ IRSKKLPWLD GEGVRDESDH
KNPVRIVLFP RSQRIDVEQL MGHLFATTDL EKSHRVNLNV IGLDGRPQVK PLKQLLSEWL
SFRSDTVTRR LKYRLQKVEN RLHLLEGLLI TFLNLDKVIH IIRNEDEPKP VLIARFGLSD
AQTEYILDTK LRQLARLEEM AIRSEQDALT KERDEINVIL DSDVQLKKLI KDELLADAKT
FGDARRAPLV ARQAAQAIDE SELVASEPMT VVLSEKGWIR AAKGHDVDPS GMSYREGDRL
LAAVRTRSTH QVSFLDSEGR AYSTLVHTLP SARGNGEPLT GRFSPAPGAS FQAMASADND
KLFVLASSHG YGFITRFENL TGRNKAGKAM IHLTPGAQVM GLAPLTDVQH DRIVAVTSAG
NLLAIAASEL PELDKGKGNK LIDIPKTKLA TERLVAVIAV ASSHTLLLYS GERTMHLSFK
DLEAYLDTRG SRGQLLPRSW HKIDTLDIQ
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