| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0691 |
|---|
| Symbol | aroB |
|---|
| ID | 6119376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 741852 |
|---|
| End bp | 742964 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641648754 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_001775319 |
|---|
| Protein GI | 170729886 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCACACCACT GCGCAGCGTC ACCGTCAACA CCCCCCCACC CTATACCATC
GCTATTGGTC CCGGCCTATT GCACGATCCT CCACGCCTGG CCGCCACCAT CCGCGGTCGG
CATGCACTCA TTCTCAGTGA TTCTGAAGTC GCCCCCCGTT ATGCCGCACA ACTGCATGAA
ACGCTACTGC GCGCCCGTCC CGATCTACAC CTCAACGTAT TCACCCTGCC AGCCGGCGAA
ACATCCAAGT CCCTAGAGAA CTTCGGCGCC GCAATCGCCC AACTCGCCAC ACTGGGCGCC
ACGCGTGATG CCTGCCTCTT TGCACTCGGT GGCGGTGTCA TCGGAGATCT AACAGGCTTT
ACCGCCGCCT GCTGGATGCG TGGCATCGAC TACGTACAAG TGCCAACCAC CTTATTAGCG
ATGGTCGACT CTTCCGTCGG CGGCAAAACC GCCGTAGACA TCCCCCAGGG TAAAAACATG
GTCGGTGCCT TCCATCCGCC ACGTGCAGTG ATCGCCGACA CCGACACCCT TGCCACACTC
CCGCTACGGG AACTACGCGC TGGTCTGAGC GAAGTCATCA AATACGGCGC AATCCGCGAC
CCCGTATTCT TCCACTGGCT CCAAACCACA CGCGAAGCAC TTCTAGCACG TGACCCCGCC
GCACTGGCCC AAGCAATCGC ACGTAGCTGC GAACACAAAG CCGATATTGT CGGACGTGAC
CCACTGGAAA AAGGGGAACG CGTCCTGCTC AATCTCGGCC ATACCTTCGG CCACGCCATC
GAAACAACAC AGGGCTACAG CACACCAGGA AGCAACAACC TCAACCACGG TGAAGCCGTC
GCCGTCGGCA TGGTACTTGC CGCACGCTTG TCAAACACAT TAGGTCTGGC ACCCGCAGAA
GACACCGAGA CACTGAAAAA CCTACTGGAT GCCTACGGCT TGCCCACTGT CCTGCCTTCA
GGTCTAAAAC CTGAAACGCT CCTGGAGCGT ATGCGCCTGG ACAAAAAAAA CATTGCCGGC
CGCTTACGCT TGGTCCTATG GCGCGGCATT GGCCACGCCG AAGCCGTACC CGACGTTGAT
GAAGCAGCCG TGCGACAGAT CCTGGCCAAC TAA
|
|---|
| Protein sequence | MTTPTPLRSV TVNTPPPYTI AIGPGLLHDP PRLAATIRGR HALILSDSEV APRYAAQLHE
TLLRARPDLH LNVFTLPAGE TSKSLENFGA AIAQLATLGA TRDACLFALG GGVIGDLTGF
TAACWMRGID YVQVPTTLLA MVDSSVGGKT AVDIPQGKNM VGAFHPPRAV IADTDTLATL
PLRELRAGLS EVIKYGAIRD PVFFHWLQTT REALLARDPA ALAQAIARSC EHKADIVGRD
PLEKGERVLL NLGHTFGHAI ETTQGYSTPG SNNLNHGEAV AVGMVLAARL SNTLGLAPAE
DTETLKNLLD AYGLPTVLPS GLKPETLLER MRLDKKNIAG RLRLVLWRGI GHAEAVPDVD
EAAVRQILAN
|
|---|
| |