Gene Xfasm12_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0684 
Symbol 
ID6119369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp733055 
End bp733735 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID641648747 
ProductDNA-3-methyladenine glycosidase 
Protein accessionYP_001775312 
Protein GI170729879 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGGT ACCCACGTGG TTTCGATGTT GTGGCAGCCT ATGATCATCT TTACCACTGC 
GACCCTGGGT TGTCGGGGTG GATGCAGCGT CTGGGTCCGT TGCCAGCTCT GCGGGGCTGG 
CGTCAGCCGT TCAACGTAGT CGATGCTCTG GCCAGAGCGA TCCTGTTCCA GCAATTGAGT 
GGTAAAGCGG CTTCAACCAT TGTTGCTCGT ATTGAGGCTG TGATTGGTAG CACCTGCTTA 
TATGCCGAAA CACTTGCGTG TATTGATGAT GCGTGCTTGC GCGCCTGCGG TGTCTCCAGC 
AACAAGATTC TGGCGTTACG CGATCTGACG CGGCGTGAAG TTGCAGGCGA GCTTCCCAGT 
GTGCGGCAGA TGGGGGCAAT GCACCATAAC ACCATCGTTG AAAAATTAAT TCCGATTCGT 
GGTATTGGTC GTTGGACTGT GGAGATGATG CTGATGTTCC GTCTTGGCCG TCCCGATGTG 
CTGCCGGTGG ATGATTTAGG GGTACGCAAG GGTATCCAGC GTGTGGATAC CCTTGCTTTC 
GTCCCGACCC CGAAGGCGCT ATGTACCCGA GGCGAATGCT GGGCACCTTA CCGCACCTAT 
GCCGGGTTAT ATCTATGGCG GATTGCCGAT TTCCATGAAG GAGAAGGAGC GATGATCTCT 
GATCGTTCGC AGGACGAGTA G
 
Protein sequence
MAWYPRGFDV VAAYDHLYHC DPGLSGWMQR LGPLPALRGW RQPFNVVDAL ARAILFQQLS 
GKAASTIVAR IEAVIGSTCL YAETLACIDD ACLRACGVSS NKILALRDLT RREVAGELPS 
VRQMGAMHHN TIVEKLIPIR GIGRWTVEMM LMFRLGRPDV LPVDDLGVRK GIQRVDTLAF 
VPTPKALCTR GECWAPYRTY AGLYLWRIAD FHEGEGAMIS DRSQDE