| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0671 |
|---|
| Symbol | |
|---|
| ID | 6119356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 718757 |
|---|
| End bp | 720820 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648734 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_001775299 |
|---|
| Protein GI | 170729866 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.195303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC ATCATCCACA AGCCAAGCAT ACGTATGCCG AAGTTGAGCA GTTTCGCCGC
CGTGCTTTGC TGAGCTTGTT TGTTGTAGTG GTGTGTCTGT TTGGTTTGGT TGGCTGGTAC
TTCAAGTTGC AGGTGCTTGA TCATGAGATC TATGCGACTC GTTCTGACGC CAATCGGATC
AAATTGCATC CAGTCGTGCC AGGGCGCGGA ATGATATATG ACCGGGACGG ACGCCTTTTG
GCGGATAACG TGCCTGCATT CCGATTGGAC GTGATGCCGG ATAAGGTTGC CGACATGGAA
GCAATGCTTG TTGAACTGGG AAAGGTGATC CCGCTTTCAG AGGATGAACT GGAGCGTTTT
CACCGTGAGC GTAAGGTGCG TCGAAGATTT ATGCCGGTGA CATTGAAGCT GCGCATGAGT
GAGGAGGAGA TGGCGCGTTT TGCAGTTGAT CGGTGGCGTT TTCCTGGTGT GGAGTTGGAA
CCCTATTTCA CTCGCCGTTA TCTTTATAGC GACTTGTTTG CTCACGTGAT CGGCTATGTC
GGTCGTATCG ACGAAAAGGA CTTGGAGACG CTGAACGGTG GGGATGCTGC GTTGACCTAC
ATCGGTAAAT CGGGCCTGGA GCGCTACTAC GAGCAGGTGT TGCGTGGCAA GATCGGTTAC
CAGCAAATCG AAACAAATGT GCAAGGACGT GCGATTCGCA GTCTGGGACG GGTAACGGCA
CAAGCGGGTG CCGACTTGCG GTTGTCGATT GACGCTGACT TGCAGCGTGC GATGGTCGCT
GCGTTTGGTC AATATGAAGG TGCGGCGGTG GCGATGGATC CGCGCAGCGG GGAAATTCTG
GGGATGGTGA GTTTACCCAG CTACGATCCC AATTTATTTG TTAATGGCAT TTCTCATGCT
CAATTCAATG CGCTTAATGC GAATCCTTCG CGGCCGCAAT TTAACCGTTT GGTCTCTGGC
GGCGTGGCTC CTGGTTCTAC ACTCAAACCG TTGATTGCGT TGGCTGGATT GGATGCCGGC
GTGCGTCGGC CCGAGGACCG GATTCTTTCC ACCGGTATGT TCTACCTGCC CGGTGTCAAT
CGGGGTTGGG GAGATTCGCA TCGTGGTGGT CATGGTTGGA CTGATTTGCG TAAATCGATC
GCACAGTCGG TTAATACTTA CTACTATAAA TTAGCGTTGG ATCTGGGCAT TGAGCGCTTC
ACCGACTACA TGCGTCGCTA TGGCCTCGGT CAGCTCACAG GGGTCGATTT GACCGGAGAG
ATTAGCGGTA TTCTCCCTTC CCTCGAATAT AAGCGTAAGG TGCGTAAGCA GGCTTGGTAT
CAGGGAGATA CGGTCAATGT TTCGATTGGG CAGGGAGACT GGAAAGTGAC CCTGCTTCAG
TTAGTACGTA GCGTTGCTGG CTTGGCCAGT GGTCACATGA ACCGCCCGCA CTTGGTGGTG
GCCGAGCGTG CCGCCTTCAG CCAGCCGTGG CAGGTGTTGC CGCAACCGCC ATCACAGCCA
ATTAGCTCGA ACCCGGGGCA TGTGCAGGTG GTACGTGAAG GGATGATAGA TACCATGCGT
CCTGGAGGGA CCGGCTACCA AGCTGCGATT GGTGCACCTT ATTCGATTGC TGGCAAAACA
GGCACTGCGC AAGTCGCCAG CCGTAAGGGG GAGGCTGCCG TTGATCCGCG CAACTTACCA
ATGCATTTGC GTCATCGTGC GTTATTCGTT GGTTTTGCTC CTGCTGATAA TCCGACGATT
GCGGTTGCGG TTGCGGTCGA GGGCGGCGGG TATGGTGCTA GCACTGCTGC ACCCATTGCA
CGCAAGATTT TTGATGCTTG GTTGCTAGGC AAGTTGCCAG AGGGCTTGGA GCCTTTGGAC
AGTGCGCGAG GTCGTACCGC GATTGGTTTG ACTCAGTTTG ATATGACTGT TGCCGGGGTA
TGCGAAGCTG GAAACCGTGC TGCCTTGCAA CTGGGAGAAC TACAGGTTTC GGTTGCTGGT
GGAATGCTAA ATTCAACCGC CATGATGCCG GTTGCGCCAC GTGCGCCAGT GACTCTCGAT
TCATTGCCGG AGGAAGACCC TTGA
|
|---|
| Protein sequence | MSVHHPQAKH TYAEVEQFRR RALLSLFVVV VCLFGLVGWY FKLQVLDHEI YATRSDANRI
KLHPVVPGRG MIYDRDGRLL ADNVPAFRLD VMPDKVADME AMLVELGKVI PLSEDELERF
HRERKVRRRF MPVTLKLRMS EEEMARFAVD RWRFPGVELE PYFTRRYLYS DLFAHVIGYV
GRIDEKDLET LNGGDAALTY IGKSGLERYY EQVLRGKIGY QQIETNVQGR AIRSLGRVTA
QAGADLRLSI DADLQRAMVA AFGQYEGAAV AMDPRSGEIL GMVSLPSYDP NLFVNGISHA
QFNALNANPS RPQFNRLVSG GVAPGSTLKP LIALAGLDAG VRRPEDRILS TGMFYLPGVN
RGWGDSHRGG HGWTDLRKSI AQSVNTYYYK LALDLGIERF TDYMRRYGLG QLTGVDLTGE
ISGILPSLEY KRKVRKQAWY QGDTVNVSIG QGDWKVTLLQ LVRSVAGLAS GHMNRPHLVV
AERAAFSQPW QVLPQPPSQP ISSNPGHVQV VREGMIDTMR PGGTGYQAAI GAPYSIAGKT
GTAQVASRKG EAAVDPRNLP MHLRHRALFV GFAPADNPTI AVAVAVEGGG YGASTAAPIA
RKIFDAWLLG KLPEGLEPLD SARGRTAIGL TQFDMTVAGV CEAGNRAALQ LGELQVSVAG
GMLNSTAMMP VAPRAPVTLD SLPEEDP
|
|---|
| |