Gene Xfasm12_0647 details

Gene Information

• Locus tag: Xfasm12_0647
• ID: 6119332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 700528
• End bp: 701241
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641648712
• Product: phage-related terminase large subunit
• Protein accession: YP_001775277
• Protein GI: 170729844
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTGGT CTGGCCAATC CCGCATCCTA GAGACCCCTC ATGGCTTTCT GAAACAGACC 
CTCTACCTCG TGCGTGGTCG CGCCGAAATC AAATCAGACC GCGCCGTCTA CCGCCCCTCA 
AAAACCACCG TTGACGAACG CGGCAAAACA CTCGCCCGAG ACGTCGGCGT CTGGGGCGTT 
GGCACCAGCG TCCTCAAACA CATGATCTAC GGCTGGCTAG GTGCCGCCCT GGCTGCCAAA 
GACAACGCCG CCCAAACAGG CACTGCCGAA GACATCAGCG CCCGCATGCT GCGCTTTCCT 
GGCGGACGTG GCGACGACAA CCATGACCCC TTGCACCCTG ATCCTGGCGC ACTGCCAGAA 
CACTACTTCG CCGGCCTCAC CGCCGAATAC TTCGACAAAG ACGCCGGACG CTGGATTAAA 
CCCCGCGGCG TGCGCAACGA ACCCCTGGAC ACCGCCGTCT ACGCCCTCTG GGCCACCCTG 
GCCCCCGCAC TCAAAGTCGA CGTCATGCGC GAATCACAGT GGGAAGCCCT CCAAGCGCTC 
TACCAACCGA CCAACGGCAG CCTCTTTGAC CCACCAGCTG CCCCGCCCAC TGACACCGCC 
CGCGGCACCC TGCGCTCAGT GACCGCCACC CCCGCCCCGC CCAGCGCCCC CCATGAAATG 
CCACCGCTTC CTAACAGCGG CTTTGGCTCC GACCGTTGGA ACAAGCGTCT ATGA 

 

Protein sequence

MRWSGQSRIL ETPHGFLKQT LYLVRGRAEI KSDRAVYRPS KTTVDERGKT LARDVGVWGV 
GTSVLKHMIY GWLGAALAAK DNAAQTGTAE DISARMLRFP GGRGDDNHDP LHPDPGALPE 
HYFAGLTAEY FDKDAGRWIK PRGVRNEPLD TAVYALWATL APALKVDVMR ESQWEALQAL 
YQPTNGSLFD PPAAPPTDTA RGTLRSVTAT PAPPSAPHEM PPLPNSGFGS DRWNKRL