| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0638 |
|---|
| Symbol | |
|---|
| ID | 6119323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 696223 |
|---|
| End bp | 696756 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641648706 |
|---|
| Product | fimbrillin |
|---|
| Protein accession | YP_001775271 |
|---|
| Protein GI | 170729838 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.37134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC AGCAAGGTTT TAATGTCATT GAACTAATGA TCTTAATCGT CATTATCGCC
GTCTTAACAG CGATCACACT GCCGATATAT CAGTATTACA TCGCTAAATC TCAAGTCACC
GCGGCACTGA TCGATATTAC ACCCGGCAAA GTGCAAACCG AGGTGCGCCT GGCAGGTGGC
GTGCCTGGCA CGACATCCCC CAATGATATT GGCCTGCATG ACACCACCAC TCGGTGCCAT
CACATTGATG TCAGTGTCGA TAGCGCAGCC GCAGAGAGCA GAACTGACTC CCTCGGGCAT
CACACAACAA CCCTCAAAGC CCCAACCTCA ACTATCACAT GCACGATCAA TGGAAATAAC
TCCGTCAATC ATAAATTTAT CCAGTGGGTT CGTACGGCCG ATTTAAATTG GGTAAGCGCT
GATAACGGCG GTAATGATTT AAAAGGCAAA TGGTTTTGCA TCACAAACGT TGCTGAAGCG
TTGCGGCCAA TCACCTGCGC AGTCGCCCTG CCTCAAATGC CAATAGGGAC GTAA
|
|---|
| Protein sequence | MKKQQGFNVI ELMILIVIIA VLTAITLPIY QYYIAKSQVT AALIDITPGK VQTEVRLAGG
VPGTTSPNDI GLHDTTTRCH HIDVSVDSAA AESRTDSLGH HTTTLKAPTS TITCTINGNN
SVNHKFIQWV RTADLNWVSA DNGGNDLKGK WFCITNVAEA LRPITCAVAL PQMPIGT
|
|---|
| |