Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0628 |
Symbol | |
ID | 6120392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 688167 |
End bp | 689285 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641648697 |
Product | ABC transporter permease |
Protein accession | YP_001775262 |
Protein GI | 170729829 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000296062 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAA AGACCGTTAC TGCACCGCAC ATTGAACAAG ACGCCCAAGA CCGTGGCCAG ATACACCTGA GCGGCAGCTG GGTGTTAGCT AACGTATTAA CGGCATCCGA ATTACTTCAG TCATATAGCA ACTCCATCCA GCACATCAAC GCACGCAATA TCGACCAACT CGATTCGGCC GGCGCATTAC AGCTGCTGCG TTTCGCCACA CGTACAGGAC TGAAAAACGA AGCAATCGAA TTTCGGGAAG AACACCGCCC CTTGATCTCC ACAATTGAGA TTCTCGACGA TGAGCATCCC AAACCTGAAC GTGACTACGG TTTTCTTGCA GCACTGGAAC GCCTAGGCAT CGCGGTTGTC AAAACCCGCC GCAATATTAT CGACGTATGC AGCTTCCTCG GCGAGAACTT GGTGAAGATA GCCCAACTGG CTCGCGAACC ACGGCGGTTC CGCATCACCT CGACCGTGCA CCACATGGAG CAAGTCGGTT TGGATGCGGT GCCTCTGGTG GTGGTGCTGT CGTATTTGGT AGGCGCGGTA ATTGCATTCC TAGGTTCGAC CATCTTGCGC AACTTTGGCG CAGAAATCTT CGTCGTCGAA TTAGTCAACA TTGCCTTCCT GCGTGAGTTC GCAGTGCTGT TAACCGCAAT TGTCCTGGCC GGTCGTACCG CCAGCGCGTT CACAGCACAA ATCGGTGCGA TGAAGTCGCG CGAAGAAATC GACGCAATCC AAACTTTAGG CCTAGACCCG ATCGACCTGC TAGTCATCCC ACGTCTTATC GCATTGCTAG TCATGCTCCC ACTATTGACC TTCATCGCAA TGATCGCCGG CTTAGCTGGA GGAATTACGG TTGGCGCATT TGACCTAGGC ATCCCTCCGC AAATGTACTT GTCACGCATG CACGAAACCA TGCAATTCCG GCACTTCATA ATAGGGATGT CCAAAGCACC ACTGTTTGCA CTGATTATTG GATTGATCGG CTGTCTGGAG GGACTCAAAG TCACCGGCAC CGCACAATCC GTCGGCAAAC ATACCACCTC CAGTGTTGTA CAAACGATCT CGCTAGTCAT CATCATTGAT GCCTTAGCAG CACTGTGGTT CATGCGTATG GGTTGGTGA
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Protein sequence | MPKKTVTAPH IEQDAQDRGQ IHLSGSWVLA NVLTASELLQ SYSNSIQHIN ARNIDQLDSA GALQLLRFAT RTGLKNEAIE FREEHRPLIS TIEILDDEHP KPERDYGFLA ALERLGIAVV KTRRNIIDVC SFLGENLVKI AQLAREPRRF RITSTVHHME QVGLDAVPLV VVLSYLVGAV IAFLGSTILR NFGAEIFVVE LVNIAFLREF AVLLTAIVLA GRTASAFTAQ IGAMKSREEI DAIQTLGLDP IDLLVIPRLI ALLVMLPLLT FIAMIAGLAG GITVGAFDLG IPPQMYLSRM HETMQFRHFI IGMSKAPLFA LIIGLIGCLE GLKVTGTAQS VGKHTTSSVV QTISLVIIID ALAALWFMRM GW
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