Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0625 |
Symbol | |
ID | 6120389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 685763 |
End bp | 686404 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648694 |
Product | hypothetical protein |
Protein accession | YP_001775259 |
Protein GI | 170729826 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.289104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGA TCCACCCCCT GGTGTGCCTA TCCGTACTCA CGCTCGCCAG TTGCTCCTCA ACACTACTAG GCGAAAAAAA ACCGACCACG ATTTATTCAC CACAAATCCA CGTCACCACC GATCCCTCCT GGCCTAGAGT GACTTGGCAT CTGACAGTAC TCCACCCCAA AGCCCCACGC ATGATCGATA CCCCACGTAT CAACGTACAA CCTACCCCAG GTGAGATCCA GGTCTACCAT AACGTCAGTT GGGCGCAACC AACCACCGAC ATGCTCGAAG ACGCACTCAT ACGCGTCTTC GAAGATTCAG GAAAAATTGC TGGCGTCACT CGGGCAGGAA CCGGCATCCG TACTGATTAC AGCCTCAGCT TAGACCTGCG CCGCTTTGAA TCCGATTACG CCGGAACACC AATGCCAACC GCAACCATTG AAGTCAACGC CAAATTGATC GGCGCACACA ATAAACGCTT GATCGCTTCG CGTACTTTCA TCGTCACACA GCCGGCAACA AATACCGATA CCTCCACGGT AGCCAACGCA TTCGGGCAAG CACTCACTCA ATTGACCAAT GAACTGGTTG GCTGGACGCT GACCATGGGT CAGAGCGACG CTATCTCCAA CGACAAGCCT TCACAACACT AA
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Protein sequence | MKLIHPLVCL SVLTLASCSS TLLGEKKPTT IYSPQIHVTT DPSWPRVTWH LTVLHPKAPR MIDTPRINVQ PTPGEIQVYH NVSWAQPTTD MLEDALIRVF EDSGKIAGVT RAGTGIRTDY SLSLDLRRFE SDYAGTPMPT ATIEVNAKLI GAHNKRLIAS RTFIVTQPAT NTDTSTVANA FGQALTQLTN ELVGWTLTMG QSDAISNDKP SQH
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