Gene Xfasm12_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0625 
Symbol 
ID6120389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp685763 
End bp686404 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID641648694 
Producthypothetical protein 
Protein accessionYP_001775259 
Protein GI170729826 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.289104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGA TCCACCCCCT GGTGTGCCTA TCCGTACTCA CGCTCGCCAG TTGCTCCTCA 
ACACTACTAG GCGAAAAAAA ACCGACCACG ATTTATTCAC CACAAATCCA CGTCACCACC
GATCCCTCCT GGCCTAGAGT GACTTGGCAT CTGACAGTAC TCCACCCCAA AGCCCCACGC
ATGATCGATA CCCCACGTAT CAACGTACAA CCTACCCCAG GTGAGATCCA GGTCTACCAT
AACGTCAGTT GGGCGCAACC AACCACCGAC ATGCTCGAAG ACGCACTCAT ACGCGTCTTC
GAAGATTCAG GAAAAATTGC TGGCGTCACT CGGGCAGGAA CCGGCATCCG TACTGATTAC
AGCCTCAGCT TAGACCTGCG CCGCTTTGAA TCCGATTACG CCGGAACACC AATGCCAACC
GCAACCATTG AAGTCAACGC CAAATTGATC GGCGCACACA ATAAACGCTT GATCGCTTCG
CGTACTTTCA TCGTCACACA GCCGGCAACA AATACCGATA CCTCCACGGT AGCCAACGCA
TTCGGGCAAG CACTCACTCA ATTGACCAAT GAACTGGTTG GCTGGACGCT GACCATGGGT
CAGAGCGACG CTATCTCCAA CGACAAGCCT TCACAACACT AA
 
Protein sequence
MKLIHPLVCL SVLTLASCSS TLLGEKKPTT IYSPQIHVTT DPSWPRVTWH LTVLHPKAPR 
MIDTPRINVQ PTPGEIQVYH NVSWAQPTTD MLEDALIRVF EDSGKIAGVT RAGTGIRTDY
SLSLDLRRFE SDYAGTPMPT ATIEVNAKLI GAHNKRLIAS RTFIVTQPAT NTDTSTVANA
FGQALTQLTN ELVGWTLTMG QSDAISNDKP SQH