| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0624 |
|---|
| Symbol | |
|---|
| ID | 6120388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 684984 |
|---|
| End bp | 685568 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641648693 |
|---|
| Product | alkylated DNA repair protein |
|---|
| Protein accession | YP_001775258 |
|---|
| Protein GI | 170729825 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.137834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT TTCCGTTTTT GCCAGGTGCG CGGATTTCTC TGCAGTCGGG ATGGTTGCCA
TCCGGTCCGG CTGATGCCTT GTTGGCAGGT CTGCTTGAAG GGGTTCCTTG GGAAGTCCAT
CGCATCCACA TCTTTGGCCG TGAGGTGAAT TCGCCGCGGT TGTCATGTTG GGTGGGAGAT
CCGCAGGCCA GTTATCGTTA TTCGGGAAGA TGCTTTCAGC CCCGTCCGTG GTGGCCGGCG
TTAGCTGAGC TGCGTATGTG TTTAGAGGGT GAAACGGGTG CTGTTTTTAA CAGTGTTTTG
CTTAATCGTT ATCGTCATGG TGGTGCTGCG ATCGGTTGGC ATAGTGACGA TGAAGCGGAA
CTTGGTATAG ATCCTCTGAT TGCATCACTT AGCTTGGGGG CTTCACGCCG TTTTGTGTTC
CGACATCGGA GGGAGCGTCA TTTGCGTGCT GAATGCGTTC TCAGTCATGG TGATTTGTTG
CTGATGGGAG GGACGACTCA ACGTGACTAT CAGCATGCTT TACCACGCAC TTTGAGGGTG
GTAGGTGAGC GGGTGAATCT GACGTTCCGG CGTATCCTGA TGTGA
|
|---|
| Protein sequence | MDLFPFLPGA RISLQSGWLP SGPADALLAG LLEGVPWEVH RIHIFGREVN SPRLSCWVGD
PQASYRYSGR CFQPRPWWPA LAELRMCLEG ETGAVFNSVL LNRYRHGGAA IGWHSDDEAE
LGIDPLIASL SLGASRRFVF RHRRERHLRA ECVLSHGDLL LMGGTTQRDY QHALPRTLRV
VGERVNLTFR RILM
|
|---|
| |