| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0618 |
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| Symbol | ispD |
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| ID | 6120382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 679617 |
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| End bp | 680312 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641648687 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001775252 |
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| Protein GI | 170729819 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTTG GTGTTTGGGC GGTGATCCCT GCGGCTGGCC GTGGGGTCCG ATTTGGTTCT
CCTGTGCCCA AGCAGTATTT ACCCGTTGTT GGGCGGCCGT TGATTGTCTA TACCCTGGAA
GCGTTGGCAG CACATCCGGC GGTGTGTGGG TTGATGGTGG TGGTGACTGA GGGCGATCTG
GCTTGGTCCG GCTGGACAGA GGTGGCAGGT AAGCCATTGT TGACTTGCAG TGGAGGCGTG
ACCCGTGCTG CTTCGGTATT GTCTGGCTTG TTGGCGTTGC CGCAGGTGGT GCACGCTGAT
GATTTCGTGT TGGTCCATGA TGCTGCGCGT CCCAACGTGG CTTTGTCCGA TCTGGAACGA
TTACTGGAGG CGGGCTGTGC CCATCCAGTG GGTGCGATCC TGGCTGTACC GGTGCGCGAC
ACGCTGAAGC GTGCCGGTTC TGATGGCAGT ATTGACGGCA CCGAGCCACG TGAACGGTTA
TGGCGTGCAT TCACTCCACA GTTGTTTCGG CGATCTCAGT TGGTGCGCGG TTTGCAGGTC
GCTGCAGCGG ATGGGATCGA GATGACCGAT GAAGCGATGG TCATGGAGCG GCAGGGATTG
CGTCCTCTTC TGGTGGAGTG TGCCGAGAGT AATTTTAAGA TCACGACGCC AGATGATTTG
GTGCGTTTCG AGTTTGAATT GGCGCGGCGT GTTTGA
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| Protein sequence | MSVGVWAVIP AAGRGVRFGS PVPKQYLPVV GRPLIVYTLE ALAAHPAVCG LMVVVTEGDL
AWSGWTEVAG KPLLTCSGGV TRAASVLSGL LALPQVVHAD DFVLVHDAAR PNVALSDLER
LLEAGCAHPV GAILAVPVRD TLKRAGSDGS IDGTEPRERL WRAFTPQLFR RSQLVRGLQV
AAADGIEMTD EAMVMERQGL RPLLVECAES NFKITTPDDL VRFEFELARR V
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