Gene Xfasm12_0600 details

Gene Information

• Locus tag: Xfasm12_0600
• Symbol: lipB
• ID: 6120364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 662234
• End bp: 662914
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641648669
• Product: lipoate-protein ligase B
• Protein accession: YP_001775234
• Protein GI: 170729801
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.180969
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATGCGT GTGGTGCTGT TGCGCCCTCG CATGTTGGAC GTGCCGCGCT GCTGCGTATG 
CTGGGTGCTC AGCCTTATGT GCCGGTTTGG CATGCGATGC AACGTTTTAC GGATGTACGC 
GATGCTACTG CAGTTGACGA GCTGTGGGTA GTTGAGCATG AGCCGGTATT CACTCTCGGG 
CAGGCTGGGA AGCTTGAGCA TGTCCTGGAC CCTGGGGAGA TCCCGGTGGT GCACGTGGAC 
CGCGGCGGTC AGGTGACCTA TCACGGTCCT GGTCAGTTGA TGGTGTATCC ACTGCTGGAT 
CTATCCCGTC TGGGGCTTGG TGTCCGTGAT TATGTTTATG GGATTGAGCA GGCGGTGATT 
AATACGCTGG CTCAGTGGAA TATTCTCGGT GAGCGGCGCG AGCATGCTCC TGGGGTCTAT 
GTCGGTGGCG CCAAAATTGC CGCGCTGGGT ATTCGGGTGC GCCGTGGTTG CAGTTTCCAC 
GGTGTGGCGT TCAACGTTGC AATGGATTTG GAGCCGTTCC ATCGTATTCA TCCTTGTGGT 
TACCGGGGGC TGCAGGTGAC CTCAGTGTTA GACTTGGGGG GGCCTTCCGA GATGGACACG 
GTGGCGGCTG CATTGCTCGC TGAGCTAGCG CGGCAGTTTG GTTTCGTGCT GCACCCCACG 
TCCGGATGGC TTAGTTCTTA G 

 

Protein sequence

MNACGAVAPS HVGRAALLRM LGAQPYVPVW HAMQRFTDVR DATAVDELWV VEHEPVFTLG 
QAGKLEHVLD PGEIPVVHVD RGGQVTYHGP GQLMVYPLLD LSRLGLGVRD YVYGIEQAVI 
NTLAQWNILG ERREHAPGVY VGGAKIAALG IRVRRGCSFH GVAFNVAMDL EPFHRIHPCG 
YRGLQVTSVL DLGGPSEMDT VAAALLAELA RQFGFVLHPT SGWLSS