Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0591 |
Symbol | |
ID | 6120355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 648372 |
End bp | 648953 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641648660 |
Product | oligoribonuclease |
Protein accession | YP_001775225 |
Protein GI | 170729792 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGCAG AGCTCCCCGT AGTCGAAAGT GACAGGCGGT TGATTTGGAT CGATTTGGAA ATGACAGGGC TGGATACCCA TCGCGATTCG ATCATTGAGA TCGCTACGGT GGTGACGGAT GCTCAGCTCA ATGTGCTTGC CGAGGGTCCT GAGTTTGCCA TCAGTCATCC TTTGAATGTG TTGGAAGCAA TGGATGAGTG GAACCGTAAT CAACACCGCC ATTCTGGGTT ATGGCAGCGT GTGCTTAATA GTGAAATTCA GCATGCTCAG GCTGAAGCAA GCACGATTGC TTTTTTACAG CAATGGGTCA AAACCGGGGC TTCACCGATG TGTGGTAATT CGATTTGTCA GGATCGACGT TTCTTGCATC GGCAGATGCC GTGTTTGGAG CGCTATTTCC ATTACCGTAA TCTGGATGTG TCCACGCTGA AGGAATTGGC TGGGTGTTGG TCCCCCAGTA TCCTGGATGG TGTGGTCAAA ACGTCCAATC ACACGGCGCT GAGCGATATC TATGATTCAA TCGCGGAATT GCGTCATTAC CGGAAATCAA TGGGGACATT CGCTGGTTTG TCAGTAGTCT GA
|
Protein sequence | MVAELPVVES DRRLIWIDLE MTGLDTHRDS IIEIATVVTD AQLNVLAEGP EFAISHPLNV LEAMDEWNRN QHRHSGLWQR VLNSEIQHAQ AEASTIAFLQ QWVKTGASPM CGNSICQDRR FLHRQMPCLE RYFHYRNLDV STLKELAGCW SPSILDGVVK TSNHTALSDI YDSIAELRHY RKSMGTFAGL SVV
|
| |