| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0587 |
|---|
| Symbol | |
|---|
| ID | 6120351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 645295 |
|---|
| End bp | 646308 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641648656 |
|---|
| Product | lipase |
|---|
| Protein accession | YP_001775221 |
|---|
| Protein GI | 170729788 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CCCGCAAACT AGCCACCGCT GCCATCTTGG CACTGGCATC CACCTCATGC
CAAGCCGCCG GCAGCCCCGG TGTCGAACAC CGCACCCAAG CCTTCCTCGA AGACTTAGCG
AAGGGAGGGG GAGCACCGAT CGAAACCCTG TCGCCTGCCA ACGCACGCCA AGTGCTTGTA
AACGCACAAA AGGGAGCCAA ACTGCCACCT GCAGACGTGA GCGAAAAGAC CATCACCATT
GATGGCAAGC AGATTGTGTT GAACATCGTT CGTCCAGCCG GCGTCAAAGG CATCCTGCCT
GGCTTCATGT TCGTCCACGG CGGCGGCTGG GTTCTTGGAG ACTTCCAAAC CCACGAACGC
CTTGTACGTG ATCTGGTGTC CGATTCCGGC GCAGTAGCCA TCTTCGTAAA CTACACCCCG
TCCCCGGAAG CACGCTACCC AGTGGCTATC AATGAAATCT ACGCAGCAAC CCAGTGGGTA
GCCGAACACG GCGCGCAGAT CAATGTCGAC GGTCAACGCC TCGCCATCGT GGGAAACAGC
GTCGGCGGCA ATATGGCCAC CGTGGTAGCA CAGATGGCCA AAGAAAAAGG CACACCAGCG
CTACGCGCAC AAGTGCTGTT CTGGCCAGTC ACTAATGCAA ACTTTGAAAA CACCTCTTAC
AACGAATTCG CAAACGGTCA CTTCCTTACA AAAAACATGA TGAAATGGTT CTGGGATACC
TATACCACTG ATTCCAAACA GCGTCAGGAC ATCTACGCAT CACCGCTGCT AGCCACAGCC
GAACAATTGA AGGGCCTACC ACCCACCCTG ATCCAAACCG CTGAGAAAGA TGTGCTCCGT
GACGAAGGCG AGGCCTATGC ACGCAAACTT GACGCAGCCG GTGTCAACGT CGTCATCACC
CGCTACAACG GCATGATTCA CGACTTCGGG CTCCTCAATG TACTCGCCGA CCTCCCTGCC
ACTCGCGCTG CGTTACACCA GGCAAGCGAA GAACTGAAGG TACACCTGCG TTAA
|
|---|
| Protein sequence | MKFTRKLATA AILALASTSC QAAGSPGVEH RTQAFLEDLA KGGGAPIETL SPANARQVLV
NAQKGAKLPP ADVSEKTITI DGKQIVLNIV RPAGVKGILP GFMFVHGGGW VLGDFQTHER
LVRDLVSDSG AVAIFVNYTP SPEARYPVAI NEIYAATQWV AEHGAQINVD GQRLAIVGNS
VGGNMATVVA QMAKEKGTPA LRAQVLFWPV TNANFENTSY NEFANGHFLT KNMMKWFWDT
YTTDSKQRQD IYASPLLATA EQLKGLPPTL IQTAEKDVLR DEGEAYARKL DAAGVNVVIT
RYNGMIHDFG LLNVLADLPA TRAALHQASE ELKVHLR
|
|---|
| |