Gene Xfasm12_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0571 
SymbolprpB 
ID6120334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp627784 
End bp628680 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content56% 
IMG OID641648640 
Product2-methylisocitrate lyase 
Protein accessionYP_001775206 
Protein GI170729773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAT CTCTCCCCAT CCAGACACCA GGCCAATGTT TCCGTACTGC TTTAATGACC 
GAGCGCCCCT TGCAAGTGAT CGGTGCAATG AATGCCTACC ACGCACTACT GGCCCAACGT
GCCGGTTACC GTGCCCTCTA TCTTTCCGGA GGCGGCGTCG CTGCCGGTTC CCTCGGCCTG
CCAGACTTGG GAATCAATAC CCTAGAAGAT GTCTTGATCG ATGTACGCCG CATCACCGAT
GTGTGTGATC TTCCCTTGCT CGTGGATATT GATACGGGTT TCGGTCCCAG CGCACTCAAT
ATCGAACGGA CTATCAAGAC ACTGATTAAA GCCGGTGCTG CTGCGTGCCA CATTGAAGAC
CAAGTAGCGG CAAAACGGTG CGGCCATCGT CCCGGAAAAG AGATCGTGTC CCTGAGCGAT
ATGGCAGACC GGGTGAAGGC TGCTGCCGAT GCCCGCACCG ATGCAACCTT CTTTTTGATT
GCCCGGACCG ATGCCATTCA GGCCGAAGGT GTGGAAGCGG CGATTGAACG CGCCCAGGCC
TATGTCGAAG CTGGCGCTGA CAGTATTTTT GCCGAGGCCG TCTCCGATTT GGAGACCTAC
CGACATTTTG TCGAAAGAAT CCGAGTCCCC GTGCTTGCCA ACATGACCGA ATTTGGTAAA
ACCCCACTGT TGACCCGCGA GCAACTAGAG GCTGTTGGAG TTGCGATGCA ACTTTTCCCA
TTATCCGCAT TCCGTGCCGC CAACAAAGCT GCTGAAACCG TGTATATGGC AATTCGCCGT
GATGGCCATC AACAGGCTGT ATTGCCGCAC ATGCAGACCC GCGCCGAACT ATACGAACGC
CTTGATTACC ATGCCTTCGA ACAGCGCTTG GATGCCCTGT CTGCCCGCAG CACCTGA
 
Protein sequence
MSTSLPIQTP GQCFRTALMT ERPLQVIGAM NAYHALLAQR AGYRALYLSG GGVAAGSLGL 
PDLGINTLED VLIDVRRITD VCDLPLLVDI DTGFGPSALN IERTIKTLIK AGAAACHIED
QVAAKRCGHR PGKEIVSLSD MADRVKAAAD ARTDATFFLI ARTDAIQAEG VEAAIERAQA
YVEAGADSIF AEAVSDLETY RHFVERIRVP VLANMTEFGK TPLLTREQLE AVGVAMQLFP
LSAFRAANKA AETVYMAIRR DGHQQAVLPH MQTRAELYER LDYHAFEQRL DALSARST