| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0569 |
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| Symbol | |
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| ID | 6120332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 623203 |
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| End bp | 627024 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641648638 |
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| Product | pathogenicity protein |
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| Protein accession | YP_001775204 |
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| Protein GI | 170729771 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATGCTC CTCAGCCCAT TGGTGCCCTG CGTCGGCGCC GTCTCTGGTT TGGTATAGGG
TTGATTGCCA CTGGCCTATT TCTCACACTG CTGGCGTTGC TGTATTGGTT ATTGCAGACC
ACCTCTGGGC GTGATGTTTT GTTGGCTCAG GTCGTGACCC GTCTACCGGC TGCTACCGCA
TTGACCTGGG ACCGTGCTGA AGGTGCTGTG GCCGGGCCGC TGACCTTACA CAACATCGAG
TTTCGCTACC AAGACATCCA TTTCCGTGCT GCGCGTTTGC GTATGGACCC AGATATCTGG
CGACTGCTCT TACTTCGGTT GCGTCTTGAT GTGCTGGAAA TGAGCAACGC CAGCCTCAGC
TTGGGTCAGA GCGAGGAACC GTTCAAGCTC CCGAGTTGGC CTGATGTGTT GCCGTCGATC
AACGTGCCCT TGGCCTTGCA GATCGATACC ATCACGATTG ATAACTTTCG CATTTCCAAA
TTAAAGCAAC CACTCATTCA TCTGCGCCGC ATCCGCGGTG CGGTCAACGT TGCTGATGGT
GAATTAAAAA TACAGCGCCT TGCCGTGGAC AGTGATCGTG GCAATATCCG TGCCGACGGT
TACTACCGCC CCCGTCACGA TTACTCCACC GACTTGACCG CCACTGCGGT GTTGCCGAGT
GTCCGTGGCC GGCCGCCCGC CAGTTTTGGC TTGGTGATCC GTGGTGACCT GGATCGCCTG
CAGCTCGCGC TTGCCGGACG TGCCCCTGCA CCATTGCAGG CCGATGTGGT GCTCAACGGC
CGCAGCGACC CTCGCTGGAC GTTCAGTGCT GCCAGTGAAC ACTTTGAACC TGGATTGTTG
CTCCCTGGTG AACTGACCGG GACTCCATCA GCGACAGCGT TGGCGTTTAA CGTGCAGGCC
CAGGGGCAAG GTGGAAAAGC TGATCTCAAG GGACAGTTCA AACAGGGAGA GCAAACAATC
GTATTGCAGC CCTCGCGCCT GCGACTGGCC AATCAAATGT TGATGGTCGA ACCACTGGTC
ATTGATGCCT TTGGAGGGCG CACCAACCTG CGTGGTAAGG TCGATCTGCG TGATCCTGCT
AACACGCGCT TCCATTTTTC AGTCAACGCC CGTGGATTAA GTTTCAAGCC CTCTCCCGAG
CCTGGGAATA CTCAAGTCCG AGCCGTGCCG GTTGTTCTCG AAGAGGCGGG ATTGGGAGTG
TCCGGCACCC TTCGTGCCTG GGCAGCAGTC GGCCGTGCAC GGCTGACGCG CGATGCACAA
CAAGCGCGTT TGATCTTCGA TGTCCGGGGA GATGCTGAAC ATGCCACCTT CAAGCAAGTC
CAAGCGGCTA CCCCTGGCGG TCTGCTTGAC TTCACTGGCG GGGTGACCTG GGCACCTGCA
TTGCGTTGGG ACCTGAAGGC CGAATTGGCG CAGTTCGATC CGGGTTATTT CATCCCTGGT
TGGAATGGTC ATGTATCCGG TCAATTGACC TCTCAAGGCC GACAACGCAC TGTATCCTCT
GGCATTGAGG CTATCGTGGC AGTGCCGGGA CTGAACGGAC AACTCCGGCA ACGTCCCATG
CAAGCCAGCG GCCGCTTTAC CCTCAAAGAT CATCAGGGTG AGGGTGCCTT CCAACTCGGC
ATCGGTGATA GCCACATCAG TGCTAAAGGG AAAGTCGGAC CGCATTTGGA TTTGGCCGTG
CAGTTACAGT CACTGCATTT GAACGACCTA TTGCCCAGCA AAGAAGGCAC CCTGAAAGGC
AGCCTGCTGC TCAGAGGCCC TGCACACACT CCAGATGTGA TTGTCGATTT GAACGGCACC
AGCCTGCGCT GGAATGACTA TCGCGCCAAA CAGTTCGCAC TGCATGGACA TTTGCCGTGG
CGCGGCAACA ACGGCAAGCT CACCCTGCAA GCACAGGAAC TTGAGATCGG CACACTGCTT
GATAGTGTTC GCATCCACGC CAGTGGTGCA GTTGAGAATC TGAATCTTCA GGCCGATGTA
CGCCATGCAA TGGTTCTGCT TACCCTGCAT GGCGGCGTCC ATCGCGATGG CGCGCGCTGG
CGCGGCAACC TTTCACAGTT ACGTATTGAA CCAGCCAAGG GGCCAGCGTG GGCACTGCGT
GCACCGGCAC AGTTTGTAAT GAACGCTCCT GCTTTCACCC TGTTCGCCGC ATGTTTGGAT
GCGCAGGGCG GCGGTGCCCT GTGTCTGCAT GCCGACTGGC CACATGAGGG ACTGGTACTG
AAGGGCCAGG CACTCCCATT GACGTTGGTG CATCCCTGGC TACCCAAGAA AAATGGCCGC
TCAATCAACC TGCGAGGTGT ACTCACACTC GATGGTCACC TGCGACCGCA TGGCGATGCC
TGGGAAGGTA GCTTCCGCGC GTCCTCCTTG GAAGGAGGCA TTCGCTTAGG AGAGCCGCGC
TACGCTGACG TGCTTGGTGT CCAAGATCGC GGTGAATTAG TCCGTTACGA CCAATTCAGC
GTCCAAGTCG ACCTGACCTC GCAGCATATC GTTGGCAAAC TCGGCATTGG CTTTCAGGGT
AACGGCTTTG TCGATGCCAA GTTCAATACC GGCTGGGATC CCTATGCGCC ACTGACAGGG
GATCTGTATA TGAACATGTC ACGCTTGTAT TGGCTGGAAA TGTTTGTCCC TGACATTGGC
AATCCACGAG GCTTGATTGA AGGCCATGTC AGCTTGCGCG GTACACGTAG CGGGCCGCTG
CTCGGTGGTG AAGCGACCCT GCGTGATTTC ACTGCTGAAT ACCCCTCAAT CGGATTGAAC
CTCAGCCAGG GTCAAGGGCG CTTCACGGCA CAGCCCGACG GATCGGCGCG GATTCTAGCC
TCTGTCAAAT CAGGAGATGG CACATTGAAT ATTGATGGTG GTCTCTCCTG GTTCGGAGAG
AACAATCCAT TGCAGCTCAA TATTCGAGGT CGCAACGTCC TTGCCTACAA CACCAGCGAA
CTACGTATCG TGTCTGACCC TGATTTACGA TTTGGCTTGA TTAATAACAC CATGCAACTG
CAAGGTGAGG TTGCAGTGTC GGAGGCTGAC ATTGATTTGG AGCGTTTAGA CCGTGGCGTC
TCGGTGTCTG AGGATGTCGT CGTTCTCGAT CCGATAGACC CGGAGCGTAC TACCGTCTCA
CCGCTGGAGA TGAACTTACG TATCGTCCTT GGCGACAAAG TCAACATGAG CGGCTTTGGT
TTGAAAGGGG GCCTTTCCGG ACAGATGCAG ATCCGCGCGC GTCCTGGCCG TGAGATGACC
GCCAATGGTG GTCTGGATGT GCGTGGCCGC TATAAAGCCT ACGGCCAGGA CTTGACCATT
ACGCGCGGTC AACTTGTCTG GAATAACAAT ATTGTTTCTG ATCCGCGGGT GAACATCCGT
GCCCAACGCC GTATAGCGGA TATCACCGCA GGGATTGATG TCAGTGGCCG CGCGCAATCA
CCACGTGCTC AGGTCTGGTC GGACCCGGTG ATGTCGCAAT CCGAAGCGCT CTCCTACTTG
GTGCTTGGAC GTAAACTGGC GACAGCCAGT AGCGACGAGA ACCAGCAAGT TGCTTCTGCC
GCCGCCGCAC TATCGGCTGG CGGTGGTCTG ATTGCCTCTC AACTTGGCGC CAAACTCGGT
CTGGATGATG CAGGTATCAG CCAATCCAGC ACTATGGGTG GCTCTGTCCT GGGGTTCGGA
AAATATCTCT CCCCTAAACT CTATGTAGGC TACGGTGTTT CGATGGTTGG CAGTGGTTCC
GTGCTAACTC TCAAATACTT ATTAAGCCGT GGTTTTGATC TTGAAGTGGA ATCCAGCACC
GTTGAGACTA AAGGCTCAGT GAATTGGCGT AAGGAAAAAT AA
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| Protein sequence | MNAPQPIGAL RRRRLWFGIG LIATGLFLTL LALLYWLLQT TSGRDVLLAQ VVTRLPAATA
LTWDRAEGAV AGPLTLHNIE FRYQDIHFRA ARLRMDPDIW RLLLLRLRLD VLEMSNASLS
LGQSEEPFKL PSWPDVLPSI NVPLALQIDT ITIDNFRISK LKQPLIHLRR IRGAVNVADG
ELKIQRLAVD SDRGNIRADG YYRPRHDYST DLTATAVLPS VRGRPPASFG LVIRGDLDRL
QLALAGRAPA PLQADVVLNG RSDPRWTFSA ASEHFEPGLL LPGELTGTPS ATALAFNVQA
QGQGGKADLK GQFKQGEQTI VLQPSRLRLA NQMLMVEPLV IDAFGGRTNL RGKVDLRDPA
NTRFHFSVNA RGLSFKPSPE PGNTQVRAVP VVLEEAGLGV SGTLRAWAAV GRARLTRDAQ
QARLIFDVRG DAEHATFKQV QAATPGGLLD FTGGVTWAPA LRWDLKAELA QFDPGYFIPG
WNGHVSGQLT SQGRQRTVSS GIEAIVAVPG LNGQLRQRPM QASGRFTLKD HQGEGAFQLG
IGDSHISAKG KVGPHLDLAV QLQSLHLNDL LPSKEGTLKG SLLLRGPAHT PDVIVDLNGT
SLRWNDYRAK QFALHGHLPW RGNNGKLTLQ AQELEIGTLL DSVRIHASGA VENLNLQADV
RHAMVLLTLH GGVHRDGARW RGNLSQLRIE PAKGPAWALR APAQFVMNAP AFTLFAACLD
AQGGGALCLH ADWPHEGLVL KGQALPLTLV HPWLPKKNGR SINLRGVLTL DGHLRPHGDA
WEGSFRASSL EGGIRLGEPR YADVLGVQDR GELVRYDQFS VQVDLTSQHI VGKLGIGFQG
NGFVDAKFNT GWDPYAPLTG DLYMNMSRLY WLEMFVPDIG NPRGLIEGHV SLRGTRSGPL
LGGEATLRDF TAEYPSIGLN LSQGQGRFTA QPDGSARILA SVKSGDGTLN IDGGLSWFGE
NNPLQLNIRG RNVLAYNTSE LRIVSDPDLR FGLINNTMQL QGEVAVSEAD IDLERLDRGV
SVSEDVVVLD PIDPERTTVS PLEMNLRIVL GDKVNMSGFG LKGGLSGQMQ IRARPGREMT
ANGGLDVRGR YKAYGQDLTI TRGQLVWNNN IVSDPRVNIR AQRRIADITA GIDVSGRAQS
PRAQVWSDPV MSQSEALSYL VLGRKLATAS SDENQQVASA AAALSAGGGL IASQLGAKLG
LDDAGISQSS TMGGSVLGFG KYLSPKLYVG YGVSMVGSGS VLTLKYLLSR GFDLEVESST
VETKGSVNWR KEK
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