| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0565 |
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| Symbol | |
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| ID | 6120328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 617557 |
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| End bp | 620058 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641648634 |
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| Product | ATP-dependent helicase |
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| Protein accession | YP_001775200 |
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| Protein GI | 170729767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACC ACGCTCTGCC AATTGATGCG CTACTACCAG CTATAACAAC GAGCTTATCC
AATCATCCAC GCCTGATTTT GGAAGCCCTA CCAGGGGCAG GCAAAACCAC CCAAGTACCG
CTGGCCTTAC TTGATGCGCC GTGGCTGAAC GGACGCAGCA TCATCCTTTT GGAACCACGC
CGGGTCGCAG CACGCAATGC GGCACTGTTC ATGGCCCGCC AATGCGGTGA AGAGGTCGGT
GGGCTTGTCG GCTATCACAT CCGGTTTGAA AGTAAAGTCT CTGCACGCAC CCGCATTCAC
GTCGTGACGG AAAGAATTCT GACCCGGATC ATCCAGGATG ACCCGCTACT GGATGGCATC
GGCGCGCTGC TGTTCGACGA ATTCCATGAG CGCCATTTGG CCAGCGACCT TGGCTTGGCG
TTGGCCCTGG ACGTGCAGAC ACAGCTACGT GAGGATCTAC GCATTGTCGT GATGTCAGCA
ACCCTGCAAG GGCAACGCTT GGCGCAATTT CTCGATGCAC CACGTCTGAC CAGCGAAGGG
CGTGCCTACC CCATTACGAT CACTCACTTT CCTGCGCGCC GTGATGAATC ACTTGAAACA
CAGGCACGCC GCGCCATTCA GCATGCTCTG GACACACACC AAGGTGACGT GCTGACCTTC
CTCCCCGGCC AGCGAGAGAT CGCCAGGTTA CAAGCCATAC TGGAGAAAAC ACTCTCCCCA
GAATTGCACG TGATGCCACT GCACGGTGAA CTACCGCTGC AAGAGCAAAC ACGTGTGCTG
GAACCAGATC AACATGGCAG GCGACGCATC GTGCTAGCCA CTAATGTCGC TGAGTCCTCA
ATCACCTTAC CGGGAATATC GGTGGTGATC GACAGCGGAT TAGCACGTGA ACCTGCCTAC
GATCCGAATA CCGGCTTCAC ACGCCTGGAT GTGGTGAGCA TCACGCAAGC TTCGGCTGAC
CAACGCGCTG GACGTGCAGG CCGCCTCGCC CCAGGCTGGG CCTATCGGCT GTGGCCGCAA
TCACAACGAC TGGAAGCACA ACGCCGACCG GAAATGATCC AAACCGAATT ATCTGGTCTG
GCCCTGGAAC TGACAGCTTG GGGCAGCAGC ACACTGCGCT TCATCGACCC CCCTCCCTCT
GGCGCGTTGA GCGCTGCACG CGAATTACTA CAACGACTGG GTGCGATCAG TAACACCTCC
ACCCTCACTC CCCTGGGTCA GCGCATGCTG GCACTGGGCA TTCATCCACG TCTGGCCGCC
ATGTTGCTGG CCCCACACGA TCCGCAGGAA CAGGCGCTGG CCTGCGATTT GGCAGCATTA
CTTGATGCGC GCGATCCACT GCGCGGCAGC GGCGACGCGC TGATTAGTCG CTGGCGTGCC
TTAGCCGAAT TACGCAGCGG CTGTCTCCCC CACGACACCA GACGCAGCAC ACTAAGAGCC
ATCGACGCCG CAACGCACCA ATGGCGAAGG CGCATCCGCT GTGACACCAC ACCACCGGAT
GCGATAGAAG CGCATACGCT CGGCAACCTA CTCACACATG CTTTCCCTGA ACGCATCGCC
GCACGTCATT CCAGTGACCC GCTGTATTAC GTATTAGCGA ACGGCCGCCG TATGCGCCTG
TTCGACAACA GTGCGCTGCA TGGCGAACCT TGGATCATCG CCAGCGAGTT ACATCACGGG
ATCAAAGACA TCCAACTGCT CTGTGGTGCC CCTTTGGATG AGAGAAGGTT GCACGCTGAC
TTCCCCGAAC GCTTCATCCA ACACGATGTC ATACGCTGGG AAACAGATAA ACGCGCCTTG
GTGGCGCAGC GTGAATCCTG CTTCGACCGC ATCGTCCTCG ACGTACGCCC CGCCGGACGC
ATTGATCCAG TACAGGCTGC AAACGTATTA ACCGGAGCCG TACGCACGCT CGGCCTGGAT
ACCCTCTCGT GGACAGAACA CCTACGCCAG TGGCAGGCAC GCGCTGTAGC ACTGCGTCAC
TGGATGCCGG AGCTTGAACT TCCAGACCTT TCCAATACAA CGTTACTAGC AACACTGGAC
ACGTGGTTAA GACCAGCATT CGCAGGGAAA ACCAGACTGG ATGCACTGGA TGAAGCGGCA
TTCGAGCAAG CAGTCAAATC GCTACTTTCG TGGACACAAC ACGCACTCAT CGACCGTCAT
GTACCCGCCC ACATCATCGT ACCGTCTGGG ATGGGACGCC ACATTGACTA TGGATTAGCC
GACGATGGCA CGCCGCAGCC GCCAGTGCTT TCTGTCAAAC TACAAGAATT ATTTGGTCTG
CCCGATACCC CACACATCGC AAAAAACCGT ATCCCTCTCA CCCTACACCT ACTCTCACCT
GGCGGGCGCC CACTGCAAGT GACTCAGGAT TTAAAGAGTT TTTGGACTAA CACGTATCCG
GAGGTGAAGA AAGAAATGAA AGGACGCTAT CCGAAACACC CATGGCCCGA CGATCCATGG
ACTGCAACCG CCACCCACCG CACGAAATCA CCTGGAAAGT AA
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| Protein sequence | MNHHALPIDA LLPAITTSLS NHPRLILEAL PGAGKTTQVP LALLDAPWLN GRSIILLEPR
RVAARNAALF MARQCGEEVG GLVGYHIRFE SKVSARTRIH VVTERILTRI IQDDPLLDGI
GALLFDEFHE RHLASDLGLA LALDVQTQLR EDLRIVVMSA TLQGQRLAQF LDAPRLTSEG
RAYPITITHF PARRDESLET QARRAIQHAL DTHQGDVLTF LPGQREIARL QAILEKTLSP
ELHVMPLHGE LPLQEQTRVL EPDQHGRRRI VLATNVAESS ITLPGISVVI DSGLAREPAY
DPNTGFTRLD VVSITQASAD QRAGRAGRLA PGWAYRLWPQ SQRLEAQRRP EMIQTELSGL
ALELTAWGSS TLRFIDPPPS GALSAARELL QRLGAISNTS TLTPLGQRML ALGIHPRLAA
MLLAPHDPQE QALACDLAAL LDARDPLRGS GDALISRWRA LAELRSGCLP HDTRRSTLRA
IDAATHQWRR RIRCDTTPPD AIEAHTLGNL LTHAFPERIA ARHSSDPLYY VLANGRRMRL
FDNSALHGEP WIIASELHHG IKDIQLLCGA PLDERRLHAD FPERFIQHDV IRWETDKRAL
VAQRESCFDR IVLDVRPAGR IDPVQAANVL TGAVRTLGLD TLSWTEHLRQ WQARAVALRH
WMPELELPDL SNTTLLATLD TWLRPAFAGK TRLDALDEAA FEQAVKSLLS WTQHALIDRH
VPAHIIVPSG MGRHIDYGLA DDGTPQPPVL SVKLQELFGL PDTPHIAKNR IPLTLHLLSP
GGRPLQVTQD LKSFWTNTYP EVKKEMKGRY PKHPWPDDPW TATATHRTKS PGK
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