| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0561 |
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| Symbol | |
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| ID | 6120324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 611399 |
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| End bp | 615085 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648630 |
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| Product | PilY1 gene product |
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| Protein accession | YP_001775196 |
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| Protein GI | 170729763 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.762386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAC AAGATTTGAT GGTAGGTATG AGCAGGATTA TTCTCAATAA CCTCTTCTTT
TTTAGATGTG TGGTTGCGGT GTTCTCGGCA CACTCGTTGG TCATCAGTGG TGCTGTACAT
GCGGGGGTGC AGATCTCTCA GTCCCCATTA CATGGTGGCG GCGACGTGCC AGGCAACCTG
GCTATTGTTG CGTCTATCGA GTTTCCCACG GTGATCAGCG TGGCTAATCT GGCCGACACC
TACACCCCAG GGGGGAGGTA TGTCGGCTAC TTCGATTCCA ACAAGTGCTA CAAATACCAC
TACAGTCCTC AGGAAAGTGA TCGTTACTTC TATCCCGTTG CTTCTCCAAG GCCTCAAGCC
AATTACGGTT GTAATACCAC AGGCGGGGTG TGGGCTGGGA ATTTTCTGAA TTGGGCTGCC
ACCCAGACGA TTGATCCATT TCGCTCCGCA TTGACTGGTG GCTATCGTGT GCGAGATACC
GTCAGCGAGA TCATCTTGGA AAAAGCAGTG ATGGATCGTG CTTATCCTGG AAATTTCCCG
CGTCGCACCA TCCAAGGCCT GGCTCTTACC ACTTCAGTGC CGGCACAGTG GCTCCGTTTC
CGTATGCGCA TTGACGGGCT CGGCAACAGA ATGCGGTTTA CTCAGTTTAC TGGCTTATCA
ATGGACCCTT TAGAAATGGA GGGTCAACCT TACGATCCTT CCAGGCATCC ATTAAACAGC
AATGATAGAG GCGTTTACGA AGTGAGCGTC AGAGTCAAAG TGTGCGATGC CTCGGTCGGC
TTGGAGTCCA ACTGCGTGGC CTATCCCAGC GGTTTCTACA AGCCCGAGGG GCTGATCCAG
GAATATTCCA AGCGTGTCCG CTATAGCGTT TTTAGTTACA AAAATGACGA CTATTACTTG
GACGATGGCG GTGTTTTGCG TGCCCGCCAG AAGTTTGTTG GGCCTAAAAC CTACTATCCG
GAGCAAGGCG AAAAAACCAA CCCCCATGCC GAATGGGATC CTCAAACTGG CGTCCTCTAT
GACAATCCCA ATCCTGAGGA TGCTAAGGCG ACTACTCATC GGGTGGGTCG TACTATCGGC
AATTCCGGGG TGATTAACTA TTTGAACAAG TTCTCTCAGA TGGAGACCGG TAAGAACACG
AAGGGGTTCG ATCCTGTCAG TGAGCTTTAC TACACGGCAT ACCGTTATTT TAAACGCCTG
GGCAATGTCC CGGAATATTC GGTATTGACG GGTTCTGTGA ATGAAAAGTA CCAGCAGGCC
GATGCGTTTC CGGTGATTAC CGATTGGGAT GACCCGATTC GTTATGCCTG CCAGAGCAAT
GTTGTTCTGG GAATCGGCGA TACCCACACC AATTTCGATA AGAATCTACC TGGGAATACC
AACACAACCG GAGAGCCTGT CAAACCCCAA GCGGTCAGAA ATGACAGAAG CATTGACGTG
GTCAAGCGCA TGGTGCAGAT CTTCCAGATG GAAGGCATGA GACAGCAGGA TGCCATGACG
TCGGCTGTGG CACCTTCATT CAACTTTCTA GTGCCTGGCG CCGGAAACAA CTCAGCCTAC
ATTGCCGCTC TGGCCTACGA TGCCCGTACC AAGGACATGC GTCCTGATCT TGAAGGGGAT
CAGCTGCTCA CAACACATTG GGTGGATGTG GTGGAGGGGG GAGATTACAA AATTCCAATA
TCAACCAACC AATACTGGTT GGCCGCGAAA TATGGCGGAT TTCAAGTGCC TGCCGGTTAC
GATCCGGATA AGACAGTTAA CCCCCTGTCT GAGGCGACTT GGTGGACCAA CGGCGAGTAC
GTCAATGGCG ATCCTAATGC CAAGCGGGCG GACAATTTCT ACGTTGCCGC CGACGCGGAA
AAGATGGTAG CCAGCCTCAA ACAGGCCTTC TCGCGCATCG TTGCCGAGAT CAAGGGGGCA
GGGACGGGAC TGTCTAGCAA CAGCGCTAGA CTTGAAACCG GTGCGGTTAC CTACCAGGCA
CAATTTTTCA GTGGCACCTG GCGTGGTGAT CTGATCGCCT ATCACGTAGA TAAAGTGACC
GGCGCGCTCA CCCCATTTTG GAACGCCAAC TTCCCGGCAT GGGAACAGCG TGTTATCAAG
TTTGCCAATG CCACCACACT GCAAGACTTC ACCAAAAAAA ATCTAGGCCA AACCGCGCTG
GCATCGGCGA GTGCGCAGCA GATTAATTAC CTGCGTGGTG ATCGCAGCCA GGAAGGCAAT
GTGCCCGGCA AACTCCGCAT CCGCAGCGGC ATCATGGGAG ATATTGTCAA CTCCCAACCG
CTCTATGTTG GTGCCCCCAA TGGACGGCTG TACACAACCG CGAACTTCAC TGGGGCGAGC
GCCTATGCCG CGTTCGCCGC CCAGCAGGCC AACCGGGTGC CGGTGGTTTA CGTGGGTGCC
AATGACGGCA TGTTGCATGC CTTCGATGCC AATACCGGTA AAGAAATATT TGCATTTGTG
CCTCGTGCGG CCATGCCCAA ATTGCTGGAG TACACCGATC AGAACTACGT ACACCAGTAC
TACGTGGATG GTGAACTGAC CGCCGCTGAT ATTTACGATA CCAAGTTGGG GTGGCGCTCG
GTGCTGGTGG GGACGTTGGG TCGAGGCGGC AAAGGTCTGT TTGCCTTGGA TGTGACCGAC
CCTTCCAATA TTCGTTTGCT GTGGGACAAA ACGTCCGCGG ATATTGGCGG CTTGGGGAAT
ACCTTGAGCA AACCGATGAT TGTGCAGACC TCCGATGGCA CCTGGTCGGT ATTGCTTGGC
AATGGTCCAA ACAGCACTGC GGATAACGCG CAACTGATCG TGATGAATCT GTTGACCGGT
CATGCAGCCC AAGTGCCCGT TAGCAAGACC TCAAACAATG GACTGTCTGG TGTATTTCCC
TGGTCCAGCC AGAGCAACGG CATTACGGAT CGCGTGTATG CAGGTGACCT GCTGGGCACG
TTGTGGCGCT TTACTTTTAG CGATAACGCT TGGAAGGTGG TGCCGCTGTT TACTGCCACG
TATCAAGGGA AGGCACAGCC GATCAGCGCA ACTCCGCTGG GGGCCATTGA GCGCTCCACG
GGGCGGATGT GGATTTTCTT TGGGACAGGG AGAGTGTTGT CTTCGCATGA TATGGATAAC
AAGGAGGTAC AGAGCTGGTA TGGCCTGATT GACCAGGGAA CGACGATTTC TGGGCGTACT
GGGCTGAGCC AGGTACAGAT TGTTGATGAG GGTGTAGTCA ATGGGTATGC CGTGCGTACG
GTTTCTGATC CTAAGAATAT AGGTACTGAT GGCTGGTATA TGGATCTGAT TTCGCCGAAA
TCCGGTAAGC AGGGAGAACG GATGATTGTG TCCAACATGT TCCGTGGAGC GGCGTTGATC
GGGACCACTC GTATTCCGGA TAACAGCGAC ATTTGCAAGC TCAGCGGCAG TGGGTTTGTC
ATGGCGATCA ACCCATTCAC TGGTGGCCGG TTGGGTCAAT GGTTTTTTGA TCTCAACACT
GGTGGTGGCA GTGGTGGTAG TGGTGGTGCG TTGAATGGTA ATCCAGTGTC TGGTGTGGGT
GTGAGCAGTG CGCCGAATAG CCCTGTATTT ACCGGCAATA TCATGCAAAT AGGAGCGGAT
GACGGTACGG TTACGTCGTT GAAGACGCCC TCCAGCGGAG GCCTCAATAT AAACCGTGTG
TCATGGCGTG AAATCTTGAG GCCGTAA
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| Protein sequence | MKEQDLMVGM SRIILNNLFF FRCVVAVFSA HSLVISGAVH AGVQISQSPL HGGGDVPGNL
AIVASIEFPT VISVANLADT YTPGGRYVGY FDSNKCYKYH YSPQESDRYF YPVASPRPQA
NYGCNTTGGV WAGNFLNWAA TQTIDPFRSA LTGGYRVRDT VSEIILEKAV MDRAYPGNFP
RRTIQGLALT TSVPAQWLRF RMRIDGLGNR MRFTQFTGLS MDPLEMEGQP YDPSRHPLNS
NDRGVYEVSV RVKVCDASVG LESNCVAYPS GFYKPEGLIQ EYSKRVRYSV FSYKNDDYYL
DDGGVLRARQ KFVGPKTYYP EQGEKTNPHA EWDPQTGVLY DNPNPEDAKA TTHRVGRTIG
NSGVINYLNK FSQMETGKNT KGFDPVSELY YTAYRYFKRL GNVPEYSVLT GSVNEKYQQA
DAFPVITDWD DPIRYACQSN VVLGIGDTHT NFDKNLPGNT NTTGEPVKPQ AVRNDRSIDV
VKRMVQIFQM EGMRQQDAMT SAVAPSFNFL VPGAGNNSAY IAALAYDART KDMRPDLEGD
QLLTTHWVDV VEGGDYKIPI STNQYWLAAK YGGFQVPAGY DPDKTVNPLS EATWWTNGEY
VNGDPNAKRA DNFYVAADAE KMVASLKQAF SRIVAEIKGA GTGLSSNSAR LETGAVTYQA
QFFSGTWRGD LIAYHVDKVT GALTPFWNAN FPAWEQRVIK FANATTLQDF TKKNLGQTAL
ASASAQQINY LRGDRSQEGN VPGKLRIRSG IMGDIVNSQP LYVGAPNGRL YTTANFTGAS
AYAAFAAQQA NRVPVVYVGA NDGMLHAFDA NTGKEIFAFV PRAAMPKLLE YTDQNYVHQY
YVDGELTAAD IYDTKLGWRS VLVGTLGRGG KGLFALDVTD PSNIRLLWDK TSADIGGLGN
TLSKPMIVQT SDGTWSVLLG NGPNSTADNA QLIVMNLLTG HAAQVPVSKT SNNGLSGVFP
WSSQSNGITD RVYAGDLLGT LWRFTFSDNA WKVVPLFTAT YQGKAQPISA TPLGAIERST
GRMWIFFGTG RVLSSHDMDN KEVQSWYGLI DQGTTISGRT GLSQVQIVDE GVVNGYAVRT
VSDPKNIGTD GWYMDLISPK SGKQGERMIV SNMFRGAALI GTTRIPDNSD ICKLSGSGFV
MAINPFTGGR LGQWFFDLNT GGGSGGSGGA LNGNPVSGVG VSSAPNSPVF TGNIMQIGAD
DGTVTSLKTP SSGGLNINRV SWREILRP
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