Gene Xfasm12_0549 details

Gene Information

• Locus tag: Xfasm12_0549
• ID: 6120956
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 597548
• End bp: 598198
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641648618
• Product: glutathione S-transferase-like protein
• Protein accession: YP_001775184
• Protein GI: 170729751
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATAATT CGGTTCCATT GTTATTGCGG AGTTCTTCAA TGAAGTTGTA CATCAAACCA 
GGTGCTTGCT CTTTGGCCGA CCACATTTTG TTGCGGTGGT CTGGTTCTTC ATTTGATCTT 
CAGTTTCTCG ACCATCAGAG TATGAAGGCA CCTGAATACC TTGCTCTGAA TCCTTCAGGT 
GCGGTGCCGG CGTTACAAGT GGGTGACTGG GTATTGACTC AGAATGCAGC CATTCTCAAT 
TACATCACTG ATATTGCTCC TGCTGAGCGT GGGTTGTCTG GTGACGGTAG CCTGAAAGCG 
CGTGCGGAGA TCAATCGCTG GATTGCTTTC TCAAGTTCCG ACGTACATCC CATGTATTGG 
GCGCTTTTTG GAGGCACCAC CTATTTGCAG GATCCACAAA TGATTGCACG CAGTCAGGAC 
AACCTCGCCA GAAATTGCGT GTGTTGTACC AGCGTGCTGA TGCACATCTT AAGCATCACA 
ATTGGCTTGC TAACGGACAG CGTTCCGGTG CTGATGCGTA TCTGTACGTC ACGTTGCGAT 
GGGCTAAAAA AGTCGGTGTG GATCTTTCTA GTTTGGATGC GTTATCAGCG TTCTTTGAGC 
GTATGGAGGC TGATCCCGGG GTGCAGGCTG CATTACAGGC GGAAGGGCTG A 

 

Protein sequence

MHNSVPLLLR SSSMKLYIKP GACSLADHIL LRWSGSSFDL QFLDHQSMKA PEYLALNPSG 
AVPALQVGDW VLTQNAAILN YITDIAPAER GLSGDGSLKA RAEINRWIAF SSSDVHPMYW 
ALFGGTTYLQ DPQMIARSQD NLARNCVCCT SVLMHILSIT IGLLTDSVPV LMRICTSRCD 
GLKKSVWIFL VWMRYQRSLS VWRLIPGCRL HYRRKG